Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
AP3D1O14617 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3D1O14617 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3D1O14617 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3D1O14617 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3D1O14617 AC239809.2-201ENST00000415381 517 ntBASIC17.67■□□□□ 0.42
AP3D1O14617 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3D1O14617 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.67■□□□□ 0.42
AP3D1O14617 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3D1O14617 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.67■□□□□ 0.42
AP3D1O14617 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.67■□□□□ 0.42
AP3D1O14617 FP475955.4-201ENST00000623131 1990 ntBASIC17.67■□□□□ 0.42
AP3D1O14617 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3D1O14617 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 IRX1P1-201ENST00000438849 1838 ntBASIC17.67■□□□□ 0.42
AP3D1O14617 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
AP3D1O14617 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.67■□□□□ 0.42
AP3D1O14617 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
AP3D1O14617 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
AP3D1O14617 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.67■□□□□ 0.42
AP3D1O14617 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
AP3D1O14617 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3D1O14617 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.66■□□□□ 0.42
AP3D1O14617 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
AP3D1O14617 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
AP3D1O14617 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3D1O14617 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3D1O14617 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
AP3D1O14617 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.66■□□□□ 0.42
AP3D1O14617 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.66■□□□□ 0.42
AP3D1O14617 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
AP3D1O14617 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.65■□□□□ 0.42
AP3D1O14617 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP3D1O14617 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
AP3D1O14617 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3D1O14617 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3D1O14617 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.65■□□□□ 0.42
AP3D1O14617 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3D1O14617 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
AP3D1O14617 POU5F1P3-201ENST00000428824 1078 ntBASIC17.65■□□□□ 0.42
AP3D1O14617 AC128676.1-201ENST00000454392 318 ntBASIC17.65■□□□□ 0.42
AP3D1O14617 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AP3D1O14617 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.65■□□□□ 0.42
AP3D1O14617 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.65■□□□□ 0.42
AP3D1O14617 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3D1O14617 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
AP3D1O14617 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
AP3D1O14617 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
AP3D1O14617 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.65■□□□□ 0.42
AP3D1O14617 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms