Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM38O00635 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM38O00635 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM38O00635 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM38O00635 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM38O00635 HIST1H2APS4-201ENST00000362070 348 ntBASIC19■□□□□ 0.63
TRIM38O00635 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19■□□□□ 0.63
TRIM38O00635 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TRIM38O00635 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19■□□□□ 0.63
TRIM38O00635 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19■□□□□ 0.63
TRIM38O00635 BX664615.1-201ENST00000443558 458 ntBASIC19■□□□□ 0.63
TRIM38O00635 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19■□□□□ 0.63
TRIM38O00635 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
TRIM38O00635 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19■□□□□ 0.63
TRIM38O00635 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19■□□□□ 0.63
TRIM38O00635 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRIM38O00635 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TRIM38O00635 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
TRIM38O00635 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM38O00635 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM38O00635 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TRIM38O00635 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM38O00635 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TRIM38O00635 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM38O00635 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM38O00635 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TRIM38O00635 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
TRIM38O00635 AK4P3-201ENST00000418260 669 ntBASIC18.99■□□□□ 0.63
TRIM38O00635 MFAP1P1-201ENST00000442257 1255 ntBASIC18.99■□□□□ 0.63
TRIM38O00635 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM38O00635 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM38O00635 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM38O00635 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 LINC01465-201ENST00000408887 1940 ntBASIC18.99■□□□□ 0.63
TRIM38O00635 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM38O00635 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM38O00635 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM38O00635 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
TRIM38O00635 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRIM38O00635 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM38O00635 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM38O00635 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM38O00635 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 AL138781.2-201ENST00000617896 1843 ntBASIC18.98■□□□□ 0.63
TRIM38O00635 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 AL032819.2-201ENST00000624543 2162 ntBASIC18.98■□□□□ 0.63
TRIM38O00635 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM38O00635 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
TRIM38O00635 FAM207BP-201ENST00000447172 505 ntBASIC18.98■□□□□ 0.63
TRIM38O00635 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM38O00635 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM38O00635 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM38O00635 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.98■□□□□ 0.63
TRIM38O00635 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRIM38O00635 AC026471.1-201ENST00000564629 3026 ntBASIC18.98■□□□□ 0.63
TRIM38O00635 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM38O00635 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM38O00635 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRIM38O00635 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM38O00635 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM38O00635 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.97■□□□□ 0.63
TRIM38O00635 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM38O00635 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 AC096733.2-201ENST00000609937 1394 ntBASIC18.97■□□□□ 0.63
TRIM38O00635 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM38O00635 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM38O00635 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM38O00635 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM38O00635 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM38O00635 HMGA1P5-201ENST00000412453 271 ntBASIC18.97■□□□□ 0.63
TRIM38O00635 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM38O00635 AC091390.4-202ENST00000476426 537 ntBASIC18.97■□□□□ 0.63
TRIM38O00635 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.97■□□□□ 0.63
TRIM38O00635 AC116562.4-202ENST00000641738 218 ntBASIC18.97■□□□□ 0.63
TRIM38O00635 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM38O00635 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM38O00635 AC009237.14-201ENST00000609975 1594 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms