Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 COA5-202ENST00000409997 557 ntTSL 4 BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 FAM8A3P-201ENST00000427218 844 ntBASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 METTL21AP1-201ENST00000438852 635 ntBASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 RFPL4AP1-201ENST00000530883 850 ntBASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 MTDHP3-201ENST00000594186 672 ntBASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 AL353692.3-201ENST00000407031 1396 ntBASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
TMEM88BA6NKF7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
TMEM88BA6NKF7 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 RBM17P3-201ENST00000417687 1192 ntBASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 AC024563.2-201ENST00000603282 481 ntBASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.95■■□□□ 1.1
TMEM88BA6NKF7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 AC004832.2-201ENST00000426397 482 ntBASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 Z83851.2-201ENST00000609564 659 ntBASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 HOXB1-202ENST00000577092 1414 ntBASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 AC104417.2-201ENST00000562989 1793 ntBASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 FEM1AP4-201ENST00000443167 1987 ntBASIC21.94■■□□□ 1.1
TMEM88BA6NKF7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 CALY-203ENST00000368558 825 ntTSL 5 BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 KRT8P3-201ENST00000519669 1449 ntBASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 TREX1-205ENST00000625293 1783 ntBASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
TMEM88BA6NKF7 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM88BA6NKF7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM88BA6NKF7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM88BA6NKF7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TMEM88BA6NKF7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TMEM88BA6NKF7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms