Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 HLA-G-202ENST00000376815 851 ntBASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 HLA-G-203ENST00000376818 1127 ntBASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
RBFOX3A6NFN3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 AC010141.2-201ENST00000452426 721 ntBASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RBFOX3A6NFN3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 AL136116.3-201ENST00000402907 1138 ntBASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.92□□□□□ -0.02
RBFOX3A6NFN3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 AC108860.2-201ENST00000562760 2183 ntBASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RBFOX3A6NFN3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms