Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CROCCP3-202ENST00000420820 1947 ntBASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MIR6786-201ENST00000616843 113 ntBASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AL390955.1-201ENST00000428694 934 ntBASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC026271.3-201ENST00000571884 352 ntBASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 LINC01568-207ENST00000641790 1380 ntBASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TEX21P-204ENST00000641479 1693 ntBASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 FITM1-202ENST00000559294 800 ntBASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC012306.2-201ENST00000609350 630 ntBASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TCRBV4S1A1TA0A5B7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 ZNF815P-204ENST00000434898 1737 ntBASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.17■□□□□ 0.02
TCRBV4S1A1TA0A5B7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms