Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 ABALON-201ENST00000629058 1903 ntBASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TCRBV9S1A1TA0A576 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 AC004264.1-201ENST00000608354 794 ntBASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TCRBV9S1A1TA0A576 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 AC068880.1-201ENST00000507289 2297 ntBASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TCRBV9S1A1TA0A576 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 RCC2P6-201ENST00000526625 1557 ntBASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.02■□□□□ 0.64
TCRBV9S1A1TA0A576 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 AL499627.1-201ENST00000569373 2188 ntBASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TCRBV9S1A1TA0A576 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TCRBV9S1A1TA0A576 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms