Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 AC004980.1-204ENST00000429707 299 ntBASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 AC133681.1-201ENST00000465482 601 ntBASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 AL445675.2-201ENST00000620291 557 ntBASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 MTMR9LP-203ENST00000426597 1545 ntBASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TCRBV7S3A2A0A539 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 AC110285.5-201ENST00000611501 352 ntBASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV7S3A2A0A539 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 RPS2P4-201ENST00000476944 856 ntBASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV7S3A2A0A539 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 NIFKP9-201ENST00000419265 221 ntBASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV7S3A2A0A539 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms