Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV12-3A0A0B4J271 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 AL023875.1-201ENST00000640777 796 ntBASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV12-3A0A0B4J271 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 KRASP1-201ENST00000407852 552 ntBASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 KRT18P6-201ENST00000555540 1265 ntBASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 AL160286.2-201ENST00000567150 934 ntBASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 AC233263.1-201ENST00000578059 224 ntBASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 MTDHP1-201ENST00000605323 784 ntBASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 FEM1AP3-201ENST00000403722 1741 ntBASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC14.07□□□□□ -0.16
TRAV12-3A0A0B4J271 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 AC239809.2-201ENST00000415381 517 ntBASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 C1QL1P1-201ENST00000568105 661 ntBASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 TBCB-214ENST00000629269 413 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 HLA-A-209ENST00000638375 975 ntBASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV12-3A0A0B4J271 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms