Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.38□□□□□ -0.11
TRAV8-2A0A0B4J237 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 LETM1P2-201ENST00000597330 2178 ntBASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 TSPY23P-201ENST00000440136 739 ntBASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 AC104581.1-202ENST00000635932 2618 ntBASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TRAV8-2A0A0B4J237 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 AC009113.1-201ENST00000570267 2443 ntBASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 WIZP1-201ENST00000531444 2299 ntBASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 AL023875.1-201ENST00000640777 796 ntBASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 AC083906.6-201ENST00000641366 219 ntBASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAV8-2A0A0B4J237 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-2A0A0B4J237 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-2A0A0B4J237 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAV8-2A0A0B4J237 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-2A0A0B4J237 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAV8-2A0A0B4J237 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms