Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.15■□□□□ 0.34
TRAV27A0A087WT01 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 ESRRAP1-201ENST00000400596 1257 ntBASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.14■□□□□ 0.33
TRAV27A0A087WT01 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 KRT16P5-201ENST00000455284 522 ntBASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV27A0A087WT01 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 Z85996.1-201ENST00000494644 937 ntBASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV27A0A087WT01 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms