Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.27■□□□□ 0.2
TRAV18A0A075B6X5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV18A0A075B6X5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV18A0A075B6X5 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.27■□□□□ 0.2
TRAV18A0A075B6X5 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRAV18A0A075B6X5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRAV18A0A075B6X5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 LSM12P1-201ENST00000411836 588 ntBASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 AC073592.3-201ENST00000625118 1834 ntBASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRAV18A0A075B6X5 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 MIR638-201ENST00000385237 100 ntBASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 AC016769.1-201ENST00000409132 1010 ntBASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRAV18A0A075B6X5 MKRN4P-201ENST00000444706 1521 ntBASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV18A0A075B6X5 AC034268.1-201ENST00000441047 882 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms