Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP9-4Q9BYQ2 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
KRTAP9-4Q9BYQ2 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.13
KRTAP9-4Q9BYQ2 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
KRTAP9-4Q9BYQ2 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 GVINP1-202ENST00000531871 7271 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 SNORD9-201ENST00000362566 104 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNA5SP375-201ENST00000362975 119 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR582-201ENST00000365731 98 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR643-201ENST00000385267 97 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR548E-201ENST00000408287 88 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 GNG5P5-201ENST00000420444 220 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC025458.1-201ENST00000506046 166 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 RN7SKP238-201ENST00000516483 249 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 IGKV1-32-201ENST00000519290 311 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC079905.1-201ENST00000549280 475 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR5194-201ENST00000582634 120 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC020916.2-201ENST00000591242 360 ntBASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP9-4Q9BYQ2 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR202-201ENST00000362219 110 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNA5SP273-201ENST00000362484 113 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR29C-201ENST00000385231 88 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 AL035660.1-201ENST00000422041 222 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 RPS29P31-201ENST00000446147 164 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 RN7SL817P-201ENST00000480777 288 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 RN7SL193P-201ENST00000491708 276 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 SNORD63.1-201ENST00000516178 80 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNA5SP438-201ENST00000516561 112 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNU5B-6P-201ENST00000516765 68 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 RNU4ATAC-201ENST00000580972 127 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR3614-201ENST00000581261 86 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR3616-201ENST00000584070 92 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR6768-201ENST00000610734 72 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MIR6809-201ENST00000612189 116 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 AP005431.1-201ENST00000618479 319 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 AL136228.1-201ENST00000622221 319 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 AC067863.3-201ENST00000624172 122 ntBASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
KRTAP9-4Q9BYQ2 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms