Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC016831.4-201ENST00000438302 307 ntBASIC5.18□□□□□ -1.58
RNF39Q9H2S5 ENPP7P9-201ENST00000514456 627 ntBASIC5.18□□□□□ -1.58
RNF39Q9H2S5 SNORA62.6-201ENST00000606322 83 ntBASIC5.18□□□□□ -1.58
RNF39Q9H2S5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.18□□□□□ -1.58
RNF39Q9H2S5 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF39Q9H2S5 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 AC121758.2-201ENST00000553271 193 ntBASIC5.17□□□□□ -1.58
RNF39Q9H2S5 MIR8054-201ENST00000620877 86 ntBASIC5.17□□□□□ -1.58
RNF39Q9H2S5 AP001005.3-201ENST00000622049 129 ntBASIC5.17□□□□□ -1.58
RNF39Q9H2S5 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
RNF39Q9H2S5 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 RNU6-249P-201ENST00000363016 102 ntBASIC5.16□□□□□ -1.58
RNF39Q9H2S5 RNA5SP109-201ENST00000391010 116 ntBASIC5.16□□□□□ -1.58
RNF39Q9H2S5 RNU6-1250P-201ENST00000391218 107 ntBASIC5.16□□□□□ -1.58
RNF39Q9H2S5 U8.16-201ENST00000391279 133 ntBASIC5.16□□□□□ -1.58
RNF39Q9H2S5 snoU13.1-201ENST00000459157 104 ntBASIC5.16□□□□□ -1.58
RNF39Q9H2S5 RN7SL481P-201ENST00000477764 299 ntBASIC5.16□□□□□ -1.58
RNF39Q9H2S5 AC105129.1-201ENST00000560250 297 ntBASIC5.16□□□□□ -1.58
RNF39Q9H2S5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
RNF39Q9H2S5 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
RNF39Q9H2S5 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
RNF39Q9H2S5 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
RNF39Q9H2S5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
RNF39Q9H2S5 AC023632.4-201ENST00000517783 191 ntBASIC5.15□□□□□ -1.59
RNF39Q9H2S5 AL662814.1-201ENST00000617364 121 ntBASIC5.15□□□□□ -1.59
RNF39Q9H2S5 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF39Q9H2S5 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 RNU4-33P-201ENST00000364316 85 ntBASIC5.14□□□□□ -1.59
RNF39Q9H2S5 AC019129.1-201ENST00000403786 261 ntBASIC5.14□□□□□ -1.59
RNF39Q9H2S5 SNRPCP3-201ENST00000474888 476 ntBASIC5.14□□□□□ -1.59
RNF39Q9H2S5 RNU7-12P-201ENST00000516030 62 ntBASIC5.14□□□□□ -1.59
RNF39Q9H2S5 RNU1-6P-201ENST00000516290 144 ntBASIC5.14□□□□□ -1.59
RNF39Q9H2S5 MIR4715-201ENST00000584117 79 ntBASIC5.14□□□□□ -1.59
RNF39Q9H2S5 AC140479.6-201ENST00000633535 357 ntBASIC5.14□□□□□ -1.59
RNF39Q9H2S5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF39Q9H2S5 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 SNORA5.1-201ENST00000384275 131 ntBASIC5.13□□□□□ -1.59
RNF39Q9H2S5 MIR607-201ENST00000385241 96 ntBASIC5.13□□□□□ -1.59
RNF39Q9H2S5 SNORA75.1-201ENST00000391130 148 ntBASIC5.13□□□□□ -1.59
RNF39Q9H2S5 RNU6-902P-201ENST00000517212 91 ntBASIC5.13□□□□□ -1.59
RNF39Q9H2S5 RPL12P50-201ENST00000603116 116 ntBASIC5.13□□□□□ -1.59
RNF39Q9H2S5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
RNF39Q9H2S5 AC131280.1-202ENST00000624067 4211 ntBASIC5.12□□□□□ -1.59
RNF39Q9H2S5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
RNF39Q9H2S5 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
RNF39Q9H2S5 MIR331-201ENST00000362302 94 ntBASIC5.12□□□□□ -1.59
RNF39Q9H2S5 RNA5SP360-201ENST00000516555 118 ntBASIC5.12□□□□□ -1.59
RNF39Q9H2S5 SUB1P4-201ENST00000566062 339 ntBASIC5.12□□□□□ -1.59
RNF39Q9H2S5 MIR5096-201ENST00000583713 70 ntBASIC5.12□□□□□ -1.59
RNF39Q9H2S5 AL078603.1-201ENST00000603824 313 ntBASIC5.12□□□□□ -1.59
RNF39Q9H2S5 MIR6758-201ENST00000620653 63 ntBASIC5.12□□□□□ -1.59
RNF39Q9H2S5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF39Q9H2S5 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RNF39Q9H2S5 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RNF39Q9H2S5 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
RNF39Q9H2S5 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 RNU6-664P-201ENST00000362381 107 ntBASIC5.11□□□□□ -1.59
RNF39Q9H2S5 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 RNA5SP397-201ENST00000391323 118 ntBASIC5.11□□□□□ -1.59
RNF39Q9H2S5 AP000867.2-201ENST00000532468 320 ntBASIC5.11□□□□□ -1.59
RNF39Q9H2S5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
RNF39Q9H2S5 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RNF39Q9H2S5 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 177.6 ms