RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 POTEDQ86YR6 584 aa8.81□□□□□ -1
SUB1P4-201ENST00000566062 AEBP2Q6ZN18 517 aaPredicted RBP7.36□□□□□ -1.23
SUB1P4-201ENST00000566062 CHIC1Q5VXU3 224 aa7.22□□□□□ -1.25
SUB1P4-201ENST00000566062 POTEHQ6S545 545 aa6.59□□□□□ -1.35
SUB1P4-201ENST00000566062 CACNB1Q02641 598 aaPredicted RBP6.37□□□□□ -1.39
SUB1P4-201ENST00000566062 SENP3Q9H4L4 574 aaPredicted RBP6.36□□□□□ -1.39
SUB1P4-201ENST00000566062 PHF23Q9BUL5 403 aaPredicted RBP6.29□□□□□ -1.4
SUB1P4-201ENST00000566062 PLSCR2Q9NRY7 297 aa6.26□□□□□ -1.41
SUB1P4-201ENST00000566062 MSH5O43196 834 aa6.17□□□□□ -1.42
SUB1P4-201ENST00000566062 FOXD1Q16676 465 aa5.98□□□□□ -1.45
SUB1P4-201ENST00000566062 PLPPR3Q6T4P5 718 aa5.87□□□□□ -1.47
SUB1P4-201ENST00000566062 PPP6R1Q9UPN7 881 aa5.53□□□□□ -1.52
SUB1P4-201ENST00000566062 ADRA2BP18089 450 aa5.51□□□□□ -1.53
SUB1P4-201ENST00000566062 PIAS4Q8N2W9 510 aaPredicted RBP5.48□□□□□ -1.53
SUB1P4-201ENST00000566062 SP7Q8TDD2 431 aaPredicted RBP5.41□□□□□ -1.54
SUB1P4-201ENST00000566062 SCAF1Q9H7N4 1312 aaKnown RBP5.2□□□□□ -1.58
SUB1P4-201ENST00000566062 KCNA4P22459 653 aa5.16□□□□□ -1.58
SUB1P4-201ENST00000566062 EHMT2Q96KQ7 1210 aa5.16□□□□□ -1.58
SUB1P4-201ENST00000566062 RNF39Q9H2S5 420 aa5.12□□□□□ -1.59
SUB1P4-201ENST00000566062 PPP4R3CPQ6ZMV5 832 aa5.11□□□□□ -1.59
SUB1P4-201ENST00000566062 LHX8Q68G74 356 aa5.07□□□□□ -1.6
SUB1P4-201ENST00000566062 DMRT2Q9Y5R5 561 aa5.06□□□□□ -1.6
SUB1P4-201ENST00000566062 NCBP3Q53F19 620 aaKnown RBP5.05□□□□□ -1.6
SUB1P4-201ENST00000566062 CNKSR2Q8WXI2 1034 aa5.04□□□□□ -1.6
SUB1P4-201ENST00000566062 MAPK8IP2Q13387 824 aaPredicted RBP4.99□□□□□ -1.61
SUB1P4-201ENST00000566062 SLC4A1APQ9BWU0 796 aaKnown RBP4.97□□□□□ -1.61
SUB1P4-201ENST00000566062 RNF216Q9NWF9 866 aaPredicted RBP4.96□□□□□ -1.62
SUB1P4-201ENST00000566062 HOXD11P31277 338 aaPredicted RBP4.95□□□□□ -1.62
SUB1P4-201ENST00000566062 C1QBPQ07021 282 aaKnown RBP4.94□□□□□ -1.62
SUB1P4-201ENST00000566062 DNAJC5BQ9UF47 199 aa4.94□□□□□ -1.62
SUB1P4-201ENST00000566062 CSRNP3Q8WYN3 585 aa4.91□□□□□ -1.62
SUB1P4-201ENST00000566062 POTEMA6NI47 508 aa4.9□□□□□ -1.63
SUB1P4-201ENST00000566062 NPM3O75607 178 aaKnown RBP4.88□□□□□ -1.63
SUB1P4-201ENST00000566062 POTEGQ6S5H5 508 aa4.82□□□□□ -1.64
SUB1P4-201ENST00000566062 PCDH10Q9P2E7 1040 aa4.79□□□□□ -1.64
SUB1P4-201ENST00000566062 DCAF8L1A6NGE4 600 aa4.72□□□□□ -1.65
SUB1P4-201ENST00000566062 ZBTB22O15209 634 aa4.72□□□□□ -1.65
SUB1P4-201ENST00000566062 CHRDL2Q6WN34 429 aa4.69□□□□□ -1.66
SUB1P4-201ENST00000566062 HAX1O00165 279 aa4.66□□□□□ -1.66
SUB1P4-201ENST00000566062 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.66□□□□□ -1.66
SUB1P4-201ENST00000566062 FOXD4L1Q9NU39 408 aa4.65□□□□□ -1.67
SUB1P4-201ENST00000566062 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.62□□□□□ -1.67
SUB1P4-201ENST00000566062 HNRNPUL2Q1KMD3 747 aaKnown RBP4.62□□□□□ -1.67
SUB1P4-201ENST00000566062 SLC4A2P04920 1241 aa4.61□□□□□ -1.67
SUB1P4-201ENST00000566062 APLP2Q06481 763 aa4.6□□□□□ -1.67
SUB1P4-201ENST00000566062 MYCNP04198 464 aaPredicted RBP4.57□□□□□ -1.68
SUB1P4-201ENST00000566062 SAMD1Q6SPF0 538 aaPredicted RBP4.57□□□□□ -1.68
SUB1P4-201ENST00000566062 U3KPZ7 1027 aaPredicted RBP4.56□□□□□ -1.68
SUB1P4-201ENST00000566062 ATXN8OSP0DMR3 200 aa4.52□□□□□ -1.69
SUB1P4-201ENST00000566062 RTN4Q9NQC3 1192 aaKnown RBP4.48□□□□□ -1.69
SUB1P4-201ENST00000566062 ZNF219Q9P2Y4 722 aaPredicted RBP4.48□□□□□ -1.69
SUB1P4-201ENST00000566062 FKBP8Q14318 412 aa4.47□□□□□ -1.69
SUB1P4-201ENST00000566062 EVX2Q03828 476 aa4.45□□□□□ -1.7
SUB1P4-201ENST00000566062 AMER1Q5JTC6 1135 aaPredicted RBP4.45□□□□□ -1.7
SUB1P4-201ENST00000566062 SLC24A1O60721 1099 aa4.44□□□□□ -1.7
SUB1P4-201ENST00000566062 CAPN15O75808 1086 aa4.42□□□□□ -1.7
SUB1P4-201ENST00000566062 DSG3P32926 999 aa4.4□□□□□ -1.71
SUB1P4-201ENST00000566062 SPINK5Q9NQ38 1064 aaPredicted RBP4.4□□□□□ -1.71
SUB1P4-201ENST00000566062 ZBTB12Q9Y330 459 aaPredicted RBP4.37□□□□□ -1.71
SUB1P4-201ENST00000566062 TRHP20396 242 aaPredicted RBP4.36□□□□□ -1.71
SUB1P4-201ENST00000566062 ATF5Q9Y2D1 282 aaPredicted RBP4.35□□□□□ -1.71
SUB1P4-201ENST00000566062 MMRN1Q13201 1228 aa4.32□□□□□ -1.72
SUB1P4-201ENST00000566062 POLA2Q14181 598 aa4.31□□□□□ -1.72
SUB1P4-201ENST00000566062 ABCB7O75027 752 aa4.27□□□□□ -1.73
SUB1P4-201ENST00000566062 OTUD5Q96G74 571 aa4.27□□□□□ -1.73
SUB1P4-201ENST00000566062 RBM42Q9BTD8 480 aaKnown RBP4.27□□□□□ -1.73
SUB1P4-201ENST00000566062 FBLN2P98095 1184 aa4.26□□□□□ -1.73
SUB1P4-201ENST00000566062 CDAN1Q8IWY9 1227 aa4.26□□□□□ -1.73
SUB1P4-201ENST00000566062 GABBR2O75899 941 aa4.23□□□□□ -1.73
SUB1P4-201ENST00000566062 PIP4P2Q8N4L2 257 aa4.23□□□□□ -1.73
SUB1P4-201ENST00000566062 SPDYE2BA6NHP3 402 aa4.21□□□□□ -1.74
SUB1P4-201ENST00000566062 SPDYE4A6NLX3 237 aa4.21□□□□□ -1.74
SUB1P4-201ENST00000566062 DCAF8L2P0C7V8 631 aa4.21□□□□□ -1.74
SUB1P4-201ENST00000566062 SPDYE6P0CI01 402 aa4.21□□□□□ -1.74
SUB1P4-201ENST00000566062 SPDYE2Q495Y8 402 aa4.21□□□□□ -1.74
SUB1P4-201ENST00000566062 FBXO3Q9UK99 471 aa4.2□□□□□ -1.74
SUB1P4-201ENST00000566062 AKT1S1Q96B36 256 aa4.19□□□□□ -1.74
SUB1P4-201ENST00000566062 MKRN4PQ13434 485 aaPredicted RBP4.18□□□□□ -1.74
SUB1P4-201ENST00000566062 LCE2DQ5TA82 110 aaPredicted RBP4.15□□□□□ -1.75
SUB1P4-201ENST00000566062 OSCARQ8IYS5 282 aa4.15□□□□□ -1.75
SUB1P4-201ENST00000566062 SSUH2Q9Y2M2 353 aa4.15□□□□□ -1.75
SUB1P4-201ENST00000566062 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
SUB1P4-201ENST00000566062 VASPP50552 380 aaPredicted RBP4.14□□□□□ -1.75
SUB1P4-201ENST00000566062 HAP1P54257 671 aaPredicted RBP4.14□□□□□ -1.75
SUB1P4-201ENST00000566062 KRTAP4-6Q9BYQ5 205 aa4.14□□□□□ -1.75
SUB1P4-201ENST00000566062 SPNS2Q8IVW8 549 aa4.13□□□□□ -1.75
SUB1P4-201ENST00000566062 FAM163AQ96GL9 167 aaPredicted RBP4.13□□□□□ -1.75
SUB1P4-201ENST00000566062 POTEIP0CG38 1075 aa4.12□□□□□ -1.75
SUB1P4-201ENST00000566062 ZNF692Q9BU19 519 aaPredicted RBP4.12□□□□□ -1.75
SUB1P4-201ENST00000566062 PLCB2Q00722 1185 aa4.11□□□□□ -1.75
SUB1P4-201ENST00000566062 IFNLR1Q8IU57 520 aaPredicted RBP4.1□□□□□ -1.75
SUB1P4-201ENST00000566062 KLHL34Q8N239 644 aa4.1□□□□□ -1.75
SUB1P4-201ENST00000566062 PROM2Q8N271 834 aa4.1□□□□□ -1.75
SUB1P4-201ENST00000566062 REM2Q8IYK8 340 aaPredicted RBP4.09□□□□□ -1.75
SUB1P4-201ENST00000566062 SPDYE1Q8NFV5 336 aaPredicted RBP4.08□□□□□ -1.76
SUB1P4-201ENST00000566062 STAG3Q9UJ98 1225 aa4.08□□□□□ -1.76
SUB1P4-201ENST00000566062 PKD2Q13563 968 aa4.05□□□□□ -1.76
SUB1P4-201ENST00000566062 ECM2O94769 699 aaPredicted RBP4.04□□□□□ -1.76
SUB1P4-201ENST00000566062 PABPN1Q86U42 306 aaKnown RBP eCLIP4.04□□□□□ -1.76
SUB1P4-201ENST00000566062 PAXIP1Q6ZW49 1069 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms