RNA–Protein interactions for RNA: ENST00000390536.2

TRAJ1-201, Transcript of T cell receptor alpha joining 1 (non-functional), humanhuman

APPRIS P1 BASIC

Gene TRAJ1, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ1-201ENST00000390536 AEBP2Q6ZN18 517 aaPredicted RBP7.96□□□□□ -1.14
TRAJ1-201ENST00000390536 CHIC1Q5VXU3 224 aa7.51□□□□□ -1.21
TRAJ1-201ENST00000390536 SENP3Q9H4L4 574 aaPredicted RBP6.86□□□□□ -1.31
TRAJ1-201ENST00000390536 PHF23Q9BUL5 403 aaPredicted RBP6.74□□□□□ -1.33
TRAJ1-201ENST00000390536 FOXD1Q16676 465 aa6.38□□□□□ -1.39
TRAJ1-201ENST00000390536 POTEDQ86YR6 584 aa6.11□□□□□ -1.43
TRAJ1-201ENST00000390536 MSH5O43196 834 aa6.06□□□□□ -1.44
TRAJ1-201ENST00000390536 PIAS4Q8N2W9 510 aaPredicted RBP6.01□□□□□ -1.45
TRAJ1-201ENST00000390536 PLPPR3Q6T4P5 718 aa5.92□□□□□ -1.46
TRAJ1-201ENST00000390536 ADRA2BP18089 450 aa5.87□□□□□ -1.47
TRAJ1-201ENST00000390536 PPP6R1Q9UPN7 881 aa5.84□□□□□ -1.47
TRAJ1-201ENST00000390536 MAPK8IP2Q13387 824 aaPredicted RBP5.42□□□□□ -1.54
TRAJ1-201ENST00000390536 SCAF1Q9H7N4 1312 aaKnown RBP5.4□□□□□ -1.55
TRAJ1-201ENST00000390536 DMRT2Q9Y5R5 561 aa5.39□□□□□ -1.55
TRAJ1-201ENST00000390536 DCAF8L1A6NGE4 600 aa5.34□□□□□ -1.55
TRAJ1-201ENST00000390536 CACNB1Q02641 598 aaPredicted RBP5.33□□□□□ -1.56
TRAJ1-201ENST00000390536 PPP4R3CPQ6ZMV5 832 aa5.17□□□□□ -1.58
TRAJ1-201ENST00000390536 HOXD11P31277 338 aaPredicted RBP5.11□□□□□ -1.59
TRAJ1-201ENST00000390536 RNF39Q9H2S5 420 aa5.11□□□□□ -1.59
TRAJ1-201ENST00000390536 CNKSR2Q8WXI2 1034 aa5.1□□□□□ -1.59
TRAJ1-201ENST00000390536 RNF216Q9NWF9 866 aaPredicted RBP5.07□□□□□ -1.6
TRAJ1-201ENST00000390536 C1QBPQ07021 282 aaKnown RBP5.05□□□□□ -1.6
TRAJ1-201ENST00000390536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.99□□□□□ -1.61
TRAJ1-201ENST00000390536 NCBP3Q53F19 620 aaKnown RBP4.97□□□□□ -1.61
TRAJ1-201ENST00000390536 DNAJC5BQ9UF47 199 aa4.9□□□□□ -1.63
TRAJ1-201ENST00000390536 NPM3O75607 178 aaKnown RBP4.86□□□□□ -1.63
TRAJ1-201ENST00000390536 CAPN15O75808 1086 aa4.86□□□□□ -1.63
TRAJ1-201ENST00000390536 U3KPZ7 1027 aaPredicted RBP4.8□□□□□ -1.64
TRAJ1-201ENST00000390536 SPINK5Q9NQ38 1064 aaPredicted RBP4.79□□□□□ -1.64
TRAJ1-201ENST00000390536 POTEHQ6S545 545 aa4.78□□□□□ -1.64
TRAJ1-201ENST00000390536 TRHP20396 242 aaPredicted RBP4.75□□□□□ -1.65
TRAJ1-201ENST00000390536 DSG3P32926 999 aa4.75□□□□□ -1.65
TRAJ1-201ENST00000390536 ABCB7O75027 752 aa4.73□□□□□ -1.65
TRAJ1-201ENST00000390536 APLP2Q06481 763 aa4.71□□□□□ -1.66
TRAJ1-201ENST00000390536 ZNF219Q9P2Y4 722 aaPredicted RBP4.69□□□□□ -1.66
TRAJ1-201ENST00000390536 KCNA4P22459 653 aa4.67□□□□□ -1.66
TRAJ1-201ENST00000390536 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.65□□□□□ -1.67
TRAJ1-201ENST00000390536 HNRNPUL2Q1KMD3 747 aaKnown RBP4.65□□□□□ -1.67
TRAJ1-201ENST00000390536 SLC4A2P04920 1241 aa4.64□□□□□ -1.67
TRAJ1-201ENST00000390536 SAMD1Q6SPF0 538 aaPredicted RBP4.62□□□□□ -1.67
TRAJ1-201ENST00000390536 RBM42Q9BTD8 480 aaKnown RBP4.6□□□□□ -1.67
TRAJ1-201ENST00000390536 POLA2Q14181 598 aa4.53□□□□□ -1.68
TRAJ1-201ENST00000390536 CHRDL2Q6WN34 429 aa4.53□□□□□ -1.68
TRAJ1-201ENST00000390536 MYCNP04198 464 aaPredicted RBP4.52□□□□□ -1.69
TRAJ1-201ENST00000390536 ZBTB12Q9Y330 459 aaPredicted RBP4.44□□□□□ -1.7
TRAJ1-201ENST00000390536 OSCARQ8IYS5 282 aa4.43□□□□□ -1.7
TRAJ1-201ENST00000390536 AKT1S1Q96B36 256 aa4.43□□□□□ -1.7
TRAJ1-201ENST00000390536 SP7Q8TDD2 431 aaPredicted RBP4.42□□□□□ -1.7
TRAJ1-201ENST00000390536 SLC4A1APQ9BWU0 796 aaKnown RBP4.42□□□□□ -1.7
TRAJ1-201ENST00000390536 HAX1O00165 279 aa4.41□□□□□ -1.7
TRAJ1-201ENST00000390536 FOXD4L1Q9NU39 408 aa4.4□□□□□ -1.71
TRAJ1-201ENST00000390536 REM2Q8IYK8 340 aaPredicted RBP4.39□□□□□ -1.71
TRAJ1-201ENST00000390536 ATF5Q9Y2D1 282 aaPredicted RBP4.39□□□□□ -1.71
TRAJ1-201ENST00000390536 PIP4P2Q8N4L2 257 aa4.38□□□□□ -1.71
TRAJ1-201ENST00000390536 PITPNM1O00562 1244 aa4.36□□□□□ -1.71
TRAJ1-201ENST00000390536 FBLN2P98095 1184 aa4.32□□□□□ -1.72
TRAJ1-201ENST00000390536 CLEC11AQ9Y240 323 aa4.32□□□□□ -1.72
TRAJ1-201ENST00000390536 FXR2P51116 673 aaKnown RBP eCLIP4.3□□□□□ -1.72
TRAJ1-201ENST00000390536 SPDYE2BA6NHP3 402 aa4.27□□□□□ -1.73
TRAJ1-201ENST00000390536 SPDYE6P0CI01 402 aa4.27□□□□□ -1.73
TRAJ1-201ENST00000390536 PRKAR2AP13861 404 aaKnown RBP4.27□□□□□ -1.73
TRAJ1-201ENST00000390536 SPDYE2Q495Y8 402 aa4.27□□□□□ -1.73
TRAJ1-201ENST00000390536 SPDYE1Q8NFV5 336 aaPredicted RBP4.26□□□□□ -1.73
TRAJ1-201ENST00000390536 ZBTB22O15209 634 aa4.25□□□□□ -1.73
TRAJ1-201ENST00000390536 EVX2Q03828 476 aa4.25□□□□□ -1.73
TRAJ1-201ENST00000390536 ZNF692Q9BU19 519 aaPredicted RBP4.24□□□□□ -1.73
TRAJ1-201ENST00000390536 ATXN8OSP0DMR3 200 aa4.22□□□□□ -1.73
TRAJ1-201ENST00000390536 CHADLQ6NUI6 762 aa4.21□□□□□ -1.74
TRAJ1-201ENST00000390536 PRR29P0C7W0 189 aa4.18□□□□□ -1.74
TRAJ1-201ENST00000390536 C19orf67A6NJJ6 358 aa4.17□□□□□ -1.74
TRAJ1-201ENST00000390536 MKRN4PQ13434 485 aaPredicted RBP4.17□□□□□ -1.74
TRAJ1-201ENST00000390536 PABPN1Q86U42 306 aaKnown RBP eCLIP4.17□□□□□ -1.74
TRAJ1-201ENST00000390536 GABBR2O75899 941 aa4.16□□□□□ -1.74
TRAJ1-201ENST00000390536 LHX8Q68G74 356 aa4.16□□□□□ -1.74
TRAJ1-201ENST00000390536 SSUH2Q9Y2M2 353 aa4.16□□□□□ -1.74
TRAJ1-201ENST00000390536 CD44P16070 742 aaKnown RBP4.14□□□□□ -1.75
TRAJ1-201ENST00000390536 DCBLD2Q96PD2 775 aa4.1□□□□□ -1.75
TRAJ1-201ENST00000390536 PLSCR2Q9NRY7 297 aa4.1□□□□□ -1.75
TRAJ1-201ENST00000390536 FARP1Q9Y4F1 1045 aaPredicted RBP4.1□□□□□ -1.75
TRAJ1-201ENST00000390536 ZRANB1Q9UGI0 708 aa4.07□□□□□ -1.76
TRAJ1-201ENST00000390536 PAK3O75914 559 aaPredicted RBP4.05□□□□□ -1.76
TRAJ1-201ENST00000390536 POTEIP0CG38 1075 aa4.04□□□□□ -1.76
TRAJ1-201ENST00000390536 CLCN6P51797 869 aa4.02□□□□□ -1.77
TRAJ1-201ENST00000390536 ZNF579Q8NAF0 562 aaKnown RBP4.02□□□□□ -1.77
TRAJ1-201ENST00000390536 STAG3Q9UJ98 1225 aa4.01□□□□□ -1.77
TRAJ1-201ENST00000390536 GALR2O43603 387 aaPredicted RBP4□□□□□ -1.77
TRAJ1-201ENST00000390536 PHF12Q96QT6 1004 aa4□□□□□ -1.77
TRAJ1-201ENST00000390536 CREBZFQ9NS37 354 aa3.99□□□□□ -1.77
TRAJ1-201ENST00000390536 SPDYE4A6NLX3 237 aa3.97□□□□□ -1.77
TRAJ1-201ENST00000390536 NPM1P06748 294 aaKnown RBP eCLIP3.97□□□□□ -1.77
TRAJ1-201ENST00000390536 EHMT2Q96KQ7 1210 aa3.95□□□□□ -1.78
TRAJ1-201ENST00000390536 POTEMA6NI47 508 aa3.94□□□□□ -1.78
TRAJ1-201ENST00000390536 CSRNP3Q8WYN3 585 aa3.94□□□□□ -1.78
TRAJ1-201ENST00000390536 OTUD5Q96G74 571 aa3.93□□□□□ -1.78
TRAJ1-201ENST00000390536 TSPYL2Q9H2G4 693 aaPredicted RBP3.93□□□□□ -1.78
TRAJ1-201ENST00000390536 METRNQ9UJH8 293 aa3.93□□□□□ -1.78
TRAJ1-201ENST00000390536 POTEGQ6S5H5 508 aa3.92□□□□□ -1.78
TRAJ1-201ENST00000390536 MS4A3Q96HJ5 214 aa3.92□□□□□ -1.78
TRAJ1-201ENST00000390536 POTEB2H3BUK9 544 aa3.91□□□□□ -1.78
TRAJ1-201ENST00000390536 PELP1Q8IZL8 1130 aaKnown RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms