RNA–Protein interactions for RNA: ENST00000617335.4

MTX3-204, Transcript of metaxin 3, humanhuman

TSL 2 BASIC

Gene MTX3, Length 6,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTX3-204ENST00000617335 NISCHQ9Y2I1 1504 aa10.83□□□□□ -0.68
MTX3-204ENST00000617335 PELP1Q8IZL8 1130 aaKnown RBP9.41□□□□□ -0.9
MTX3-204ENST00000617335 DCAF1Q9Y4B6 1507 aa9.35□□□□□ -0.91
MTX3-204ENST00000617335 CCDC180Q9P1Z9 1646 aa9.34□□□□□ -0.91
MTX3-204ENST00000617335 ZCCHC6Q5VYS8 1495 aaKnown RBP9.24□□□□□ -0.93
MTX3-204ENST00000617335 DCAF8L2P0C7V8 631 aa9.23□□□□□ -0.93
MTX3-204ENST00000617335 MYO15BQ96JP2 1530 aa9.21□□□□□ -0.94
MTX3-204ENST00000617335 ERICH6Q7L0X2 663 aa9.07□□□□□ -0.96
MTX3-204ENST00000617335 CCER1Q8TC90 406 aaPredicted RBP8.98□□□□□ -0.97
MTX3-204ENST00000617335 MYT1Q01538 1121 aa8.78□□□□□ -1
MTX3-204ENST00000617335 APLP2Q06481 763 aa8.75□□□□□ -1.01
MTX3-204ENST00000617335 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
MTX3-204ENST00000617335 SUPT5HO00267 1087 aaKnown RBP8.71□□□□□ -1.02
MTX3-204ENST00000617335 CENPBP07199 599 aaPredicted RBP8.7□□□□□ -1.02
MTX3-204ENST00000617335 FAM9AQ8IZU1 332 aaPredicted RBP8.66□□□□□ -1.02
MTX3-204ENST00000617335 NEFLP07196 543 aa8.63□□□□□ -1.03
MTX3-204ENST00000617335 ABCC9O60706 1549 aa8.63□□□□□ -1.03
MTX3-204ENST00000617335 YTHDC1Q96MU7 727 aaKnown RBP8.6□□□□□ -1.03
MTX3-204ENST00000617335 NACADO15069 1562 aa8.58□□□□□ -1.04
MTX3-204ENST00000617335 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
MTX3-204ENST00000617335 CHIC1Q5VXU3 224 aa8.56□□□□□ -1.04
MTX3-204ENST00000617335 RSF1Q96T23 1441 aaPredicted RBP8.51□□□□□ -1.05
MTX3-204ENST00000617335 TTBK1Q5TCY1 1321 aaPredicted RBP8.48□□□□□ -1.05
MTX3-204ENST00000617335 PCGF6Q9BYE7 350 aa8.48□□□□□ -1.05
MTX3-204ENST00000617335 SHROOM4Q9ULL8 1493 aa8.44□□□□□ -1.06
MTX3-204ENST00000617335 RB1CC1Q8TDY2 1594 aa8.43□□□□□ -1.06
MTX3-204ENST00000617335 ZEB1P37275 1124 aaPredicted RBP8.4□□□□□ -1.07
MTX3-204ENST00000617335 EIF4G1Q04637 1599 aaKnown RBP8.38□□□□□ -1.07
MTX3-204ENST00000617335 PEG3Q9GZU2 1588 aa8.38□□□□□ -1.07
MTX3-204ENST00000617335 RTL5Q5HYW3 569 aaPredicted RBP8.34□□□□□ -1.07
MTX3-204ENST00000617335 ATP1B4Q9UN42 357 aaPredicted RBP8.34□□□□□ -1.07
MTX3-204ENST00000617335 BAZ1AQ9NRL2 1556 aaPredicted RBP8.33□□□□□ -1.08
MTX3-204ENST00000617335 ZNF316A6NFI3 1004 aaPredicted RBP8.32□□□□□ -1.08
MTX3-204ENST00000617335 RANGAP1P46060 587 aaPredicted RBP8.3□□□□□ -1.08
MTX3-204ENST00000617335 HRCP23327 699 aa8.28□□□□□ -1.08
MTX3-204ENST00000617335 EEA1Q15075 1411 aa8.27□□□□□ -1.09
MTX3-204ENST00000617335 WRNQ14191 1432 aaPredicted RBP eCLIP8.27□□□□□ -1.09
MTX3-204ENST00000617335 CLSPNQ9HAW4 1339 aa8.25□□□□□ -1.09
MTX3-204ENST00000617335 MROH2BQ7Z745 1585 aa8.23□□□□□ -1.09
MTX3-204ENST00000617335 POLR3GLQ9BT43 218 aa8.22□□□□□ -1.09
MTX3-204ENST00000617335 CECR2Q9BXF3 1484 aa8.2□□□□□ -1.1
MTX3-204ENST00000617335 TOP2AP11388 1531 aaKnown RBP8.18□□□□□ -1.1
MTX3-204ENST00000617335 MYT1LQ9UL68 1186 aa8.15□□□□□ -1.1
MTX3-204ENST00000617335 SLC4A1APQ9BWU0 796 aaKnown RBP8.12□□□□□ -1.11
MTX3-204ENST00000617335 CNGB1Q14028 1251 aaPredicted RBP8.12□□□□□ -1.11
MTX3-204ENST00000617335 SMARCA4P51532 1647 aa8.11□□□□□ -1.11
MTX3-204ENST00000617335 BICRAQ9NZM4 1560 aa8.11□□□□□ -1.11
MTX3-204ENST00000617335 UBTFP17480 764 aaKnown RBP8.09□□□□□ -1.11
MTX3-204ENST00000617335 SCRIBQ14160 1630 aa8.09□□□□□ -1.12
MTX3-204ENST00000617335 SMARCA2P51531 1590 aa8.08□□□□□ -1.12
MTX3-204ENST00000617335 ZBTB47Q9UFB7 747 aaPredicted RBP8.08□□□□□ -1.12
MTX3-204ENST00000617335 TRIM26Q12899 539 aaPredicted RBP8.07□□□□□ -1.12
MTX3-204ENST00000617335 TNIKQ9UKE5 1360 aa8.05□□□□□ -1.12
MTX3-204ENST00000617335 EIF5BO60841 1220 aaKnown RBP8.02□□□□□ -1.12
MTX3-204ENST00000617335 NCAPD3P42695 1498 aa8.02□□□□□ -1.13
MTX3-204ENST00000617335 TRIM41Q8WV44 630 aa8.02□□□□□ -1.13
MTX3-204ENST00000617335 GLIPR1L2Q4G1C9 344 aa8.02□□□□□ -1.13
MTX3-204ENST00000617335 HMGXB3Q12766 1538 aa8.01□□□□□ -1.13
MTX3-204ENST00000617335 BAZ1BQ9UIG0 1483 aaKnown RBP8□□□□□ -1.13
MTX3-204ENST00000617335 CCDC88BA6NC98 1476 aa8□□□□□ -1.13
MTX3-204ENST00000617335 WIZO95785 1651 aa7.98□□□□□ -1.13
MTX3-204ENST00000617335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.98□□□□□ -1.13
MTX3-204ENST00000617335 HNRNPUL2Q1KMD3 747 aaKnown RBP7.98□□□□□ -1.13
MTX3-204ENST00000617335 ATAD2BQ9ULI0 1458 aa7.98□□□□□ -1.13
MTX3-204ENST00000617335 ANP32BQ92688 251 aaKnown RBP7.97□□□□□ -1.13
MTX3-204ENST00000617335 ITGAEP38570 1179 aa7.97□□□□□ -1.13
MTX3-204ENST00000617335 KIF21BO75037 1637 aa7.96□□□□□ -1.13
MTX3-204ENST00000617335 BCL11AQ9H165 835 aa7.95□□□□□ -1.14
MTX3-204ENST00000617335 PRXQ9BXM0 1461 aa7.94□□□□□ -1.14
MTX3-204ENST00000617335 ERICH3Q5RHP9 1530 aa7.94□□□□□ -1.14
MTX3-204ENST00000617335 CDK11AQ9UQ88 783 aaPredicted RBP7.93□□□□□ -1.14
MTX3-204ENST00000617335 SLC24A1O60721 1099 aa7.93□□□□□ -1.14
MTX3-204ENST00000617335 PPARGC1BQ86YN6 1023 aaKnown RBP7.93□□□□□ -1.14
MTX3-204ENST00000617335 MAP3K1Q13233 1512 aa7.92□□□□□ -1.14
MTX3-204ENST00000617335 CUX2O14529 1486 aa7.9□□□□□ -1.14
MTX3-204ENST00000617335 UNC13AQ9UPW8 1703 aa7.9□□□□□ -1.14
MTX3-204ENST00000617335 CEP164Q9UPV0 1460 aa7.9□□□□□ -1.15
MTX3-204ENST00000617335 CANXP27824 592 aaKnown RBP7.89□□□□□ -1.15
MTX3-204ENST00000617335 BCANQ96GW7 911 aa7.89□□□□□ -1.15
MTX3-204ENST00000617335 CFTRP13569 1480 aa7.87□□□□□ -1.15
MTX3-204ENST00000617335 CDK11BP21127 795 aaKnown RBP7.87□□□□□ -1.15
MTX3-204ENST00000617335 GOLGA3Q08378 1498 aa7.87□□□□□ -1.15
MTX3-204ENST00000617335 BIVM-ERCC5R4GMW8 1640 aa7.86□□□□□ -1.15
MTX3-204ENST00000617335 CSRNP3Q8WYN3 585 aa7.86□□□□□ -1.15
MTX3-204ENST00000617335 TOP2BQ02880 1626 aa7.86□□□□□ -1.15
MTX3-204ENST00000617335 ANP32AP39687 249 aaKnown RBP7.86□□□□□ -1.15
MTX3-204ENST00000617335 LOC105371045A0A1W2PR82 267 aa7.85□□□□□ -1.15
MTX3-204ENST00000617335 VPS8Q8N3P4 1428 aa7.85□□□□□ -1.15
MTX3-204ENST00000617335 CEP162Q5TB80 1403 aa7.84□□□□□ -1.15
MTX3-204ENST00000617335 NEFMP07197 916 aa7.84□□□□□ -1.16
MTX3-204ENST00000617335 HSP90AA1P07900 732 aaKnown RBP7.83□□□□□ -1.16
MTX3-204ENST00000617335 NPM2Q86SE8 214 aaKnown RBP7.8□□□□□ -1.16
MTX3-204ENST00000617335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.8□□□□□ -1.16
MTX3-204ENST00000617335 DIEXFQ68CQ4 756 aaKnown RBP7.79□□□□□ -1.16
MTX3-204ENST00000617335 SYNJ1O43426 1573 aa7.79□□□□□ -1.16
MTX3-204ENST00000617335 SOGA1O94964 1423 aa7.78□□□□□ -1.16
MTX3-204ENST00000617335 CLIP1P30622 1438 aa7.76□□□□□ -1.17
MTX3-204ENST00000617335 ANP32CO43423 234 aa7.75□□□□□ -1.17
MTX3-204ENST00000617335 TNNT2P45379 298 aaPredicted RBP7.75□□□□□ -1.17
MTX3-204ENST00000617335 UPF2Q9HAU5 1272 aaKnown RBP7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms