RNA–Protein interactions for RNA: ENST00000391218.1

RNU6-1250P-201, Transcript of RNA, U6 small nuclear 1250, pseudogene, humanhuman

BASIC

Gene RNU6-1250P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1250P-201ENST00000391218 POTEDQ86YR6 584 aa8.94□□□□□ -0.98
RNU6-1250P-201ENST00000391218 AEBP2Q6ZN18 517 aaPredicted RBP7.04□□□□□ -1.28
RNU6-1250P-201ENST00000391218 POTEHQ6S545 545 aa6.67□□□□□ -1.34
RNU6-1250P-201ENST00000391218 CHIC1Q5VXU3 224 aa6.49□□□□□ -1.37
RNU6-1250P-201ENST00000391218 CACNB1Q02641 598 aaPredicted RBP6.43□□□□□ -1.38
RNU6-1250P-201ENST00000391218 PLSCR2Q9NRY7 297 aa6.35□□□□□ -1.39
RNU6-1250P-201ENST00000391218 MSH5O43196 834 aa6.21□□□□□ -1.42
RNU6-1250P-201ENST00000391218 SENP3Q9H4L4 574 aaPredicted RBP6.2□□□□□ -1.42
RNU6-1250P-201ENST00000391218 FOXD1Q16676 465 aa6.04□□□□□ -1.44
RNU6-1250P-201ENST00000391218 PHF23Q9BUL5 403 aaPredicted RBP5.93□□□□□ -1.46
RNU6-1250P-201ENST00000391218 SP7Q8TDD2 431 aaPredicted RBP5.47□□□□□ -1.53
RNU6-1250P-201ENST00000391218 PIAS4Q8N2W9 510 aaPredicted RBP5.27□□□□□ -1.57
RNU6-1250P-201ENST00000391218 RNF39Q9H2S5 420 aa5.16□□□□□ -1.58
RNU6-1250P-201ENST00000391218 LHX8Q68G74 356 aa5.12□□□□□ -1.59
RNU6-1250P-201ENST00000391218 POTEMA6NI47 508 aa4.96□□□□□ -1.62
RNU6-1250P-201ENST00000391218 C1QBPQ07021 282 aaKnown RBP4.95□□□□□ -1.62
RNU6-1250P-201ENST00000391218 POTEGQ6S5H5 508 aa4.86□□□□□ -1.63
RNU6-1250P-201ENST00000391218 PCDH10Q9P2E7 1040 aa4.79□□□□□ -1.64
RNU6-1250P-201ENST00000391218 CHRDL2Q6WN34 429 aa4.73□□□□□ -1.65
RNU6-1250P-201ENST00000391218 DCAF8L1A6NGE4 600 aa4.72□□□□□ -1.65
RNU6-1250P-201ENST00000391218 HAX1O00165 279 aa4.69□□□□□ -1.66
RNU6-1250P-201ENST00000391218 DMRT2Q9Y5R5 561 aa4.65□□□□□ -1.67
RNU6-1250P-201ENST00000391218 EVX2Q03828 476 aa4.5□□□□□ -1.69
RNU6-1250P-201ENST00000391218 MAPK8IP2Q13387 824 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1250P-201ENST00000391218 PPP6R1Q9UPN7 881 aa4.4□□□□□ -1.71
RNU6-1250P-201ENST00000391218 MMRN1Q13201 1228 aa4.35□□□□□ -1.71
RNU6-1250P-201ENST00000391218 ADRA2BP18089 450 aa4.32□□□□□ -1.72
RNU6-1250P-201ENST00000391218 OTUD5Q96G74 571 aa4.31□□□□□ -1.72
RNU6-1250P-201ENST00000391218 DSG3P32926 999 aa4.3□□□□□ -1.72
RNU6-1250P-201ENST00000391218 CDAN1Q8IWY9 1227 aa4.29□□□□□ -1.72
RNU6-1250P-201ENST00000391218 PIP4P2Q8N4L2 257 aa4.27□□□□□ -1.73
RNU6-1250P-201ENST00000391218 GABBR2O75899 941 aa4.26□□□□□ -1.73
RNU6-1250P-201ENST00000391218 LCE2DQ5TA82 110 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1250P-201ENST00000391218 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
RNU6-1250P-201ENST00000391218 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
RNU6-1250P-201ENST00000391218 POTEIP0CG38 1075 aa4.17□□□□□ -1.74
RNU6-1250P-201ENST00000391218 SPNS2Q8IVW8 549 aa4.17□□□□□ -1.74
RNU6-1250P-201ENST00000391218 FAM163AQ96GL9 167 aaPredicted RBP4.15□□□□□ -1.75
RNU6-1250P-201ENST00000391218 RBM42Q9BTD8 480 aaKnown RBP4.12□□□□□ -1.75
RNU6-1250P-201ENST00000391218 CAPN15O75808 1086 aa4.02□□□□□ -1.77
RNU6-1250P-201ENST00000391218 POTEB2H3BUK9 544 aa4.01□□□□□ -1.77
RNU6-1250P-201ENST00000391218 SPINK5Q9NQ38 1064 aaPredicted RBP3.94□□□□□ -1.78
RNU6-1250P-201ENST00000391218 FXR2P51116 673 aaKnown RBP eCLIP3.92□□□□□ -1.78
RNU6-1250P-201ENST00000391218 C19orf67A6NJJ6 358 aa3.87□□□□□ -1.79
RNU6-1250P-201ENST00000391218 DNAJC5BQ9UF47 199 aa3.87□□□□□ -1.79
RNU6-1250P-201ENST00000391218 SCAF1Q9H7N4 1312 aaKnown RBP3.84□□□□□ -1.79
RNU6-1250P-201ENST00000391218 ABCB7O75027 752 aa3.83□□□□□ -1.8
RNU6-1250P-201ENST00000391218 DCBLD2Q96PD2 775 aa3.83□□□□□ -1.8
RNU6-1250P-201ENST00000391218 HOXD11P31277 338 aaPredicted RBP3.81□□□□□ -1.8
RNU6-1250P-201ENST00000391218 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.73□□□□□ -1.81
RNU6-1250P-201ENST00000391218 PITPNM1O00562 1244 aa3.7□□□□□ -1.82
RNU6-1250P-201ENST00000391218 REM2Q8IYK8 340 aaPredicted RBP3.68□□□□□ -1.82
RNU6-1250P-201ENST00000391218 KRTAP17-1Q9BYP8 105 aa3.68□□□□□ -1.82
RNU6-1250P-201ENST00000391218 AKT1S1Q96B36 256 aa3.67□□□□□ -1.82
RNU6-1250P-201ENST00000391218 POTEJP0CG39 1038 aa3.66□□□□□ -1.82
RNU6-1250P-201ENST00000391218 KRTAP1-3Q8IUG1 177 aa3.64□□□□□ -1.83
RNU6-1250P-201ENST00000391218 MAMSTRQ6ZN01 415 aa3.63□□□□□ -1.83
RNU6-1250P-201ENST00000391218 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.59□□□□□ -1.83
RNU6-1250P-201ENST00000391218 PRKAR2AP13861 404 aaKnown RBP3.59□□□□□ -1.83
RNU6-1250P-201ENST00000391218 ST18O60284 1047 aa3.58□□□□□ -1.84
RNU6-1250P-201ENST00000391218 TRHP20396 242 aaPredicted RBP3.58□□□□□ -1.84
RNU6-1250P-201ENST00000391218 SCUBE2Q9NQ36 999 aa3.58□□□□□ -1.84
RNU6-1250P-201ENST00000391218 KRTAP4-8Q9BYQ9 185 aa3.57□□□□□ -1.84
RNU6-1250P-201ENST00000391218 XP32Q5T750 250 aa3.56□□□□□ -1.84
RNU6-1250P-201ENST00000391218 KRTAP9-6A0A140TA67 174 aa3.55□□□□□ -1.84
RNU6-1250P-201ENST00000391218 SUZ12Q15022 739 aaKnown RBP3.55□□□□□ -1.84
RNU6-1250P-201ENST00000391218 RNF166Q96A37 237 aaPredicted RBP3.54□□□□□ -1.84
RNU6-1250P-201ENST00000391218 KRTAP9-2Q9BYQ4 174 aa3.54□□□□□ -1.84
RNU6-1250P-201ENST00000391218 KRTAP9-8Q9BYQ0 159 aa3.52□□□□□ -1.85
RNU6-1250P-201ENST00000391218 IRX2Q9BZI1 471 aaPredicted RBP3.51□□□□□ -1.85
RNU6-1250P-201ENST00000391218 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
RNU6-1250P-201ENST00000391218 KRTAP3-3Q9BYR6 98 aa3.48□□□□□ -1.85
RNU6-1250P-201ENST00000391218 KRTAP3-2Q9BYR7 98 aa3.48□□□□□ -1.85
RNU6-1250P-201ENST00000391218 CLCN6P51797 869 aa3.46□□□□□ -1.86
RNU6-1250P-201ENST00000391218 U3KPZ7 1027 aaPredicted RBP3.45□□□□□ -1.86
RNU6-1250P-201ENST00000391218 KRTAP4-8A0A0G2JLE6 195 aa3.44□□□□□ -1.86
RNU6-1250P-201ENST00000391218 PELP1Q8IZL8 1130 aaKnown RBP3.42□□□□□ -1.86
RNU6-1250P-201ENST00000391218 METRNQ9UJH8 293 aa3.42□□□□□ -1.86
RNU6-1250P-201ENST00000391218 MARVELD3Q96A59 401 aa3.4□□□□□ -1.87
RNU6-1250P-201ENST00000391218 ZNF219Q9P2Y4 722 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1250P-201ENST00000391218 CD44P16070 742 aaKnown RBP3.38□□□□□ -1.87
RNU6-1250P-201ENST00000391218 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
RNU6-1250P-201ENST00000391218 PLA2G2EQ9NZK7 142 aa3.38□□□□□ -1.87
RNU6-1250P-201ENST00000391218 Q6ZNB5 142 aa3.37□□□□□ -1.87
RNU6-1250P-201ENST00000391218 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
RNU6-1250P-201ENST00000391218 KRTAP9-4Q9BYQ2 154 aa3.36□□□□□ -1.87
RNU6-1250P-201ENST00000391218 KRTAP4-7Q9BYR0 210 aa3.36□□□□□ -1.87
RNU6-1250P-201ENST00000391218 GALR2O43603 387 aaPredicted RBP3.35□□□□□ -1.87
RNU6-1250P-201ENST00000391218 PSMG3-AS1Q96PY0 264 aa3.34□□□□□ -1.87
RNU6-1250P-201ENST00000391218 RNF216Q9NWF9 866 aaPredicted RBP3.34□□□□□ -1.87
RNU6-1250P-201ENST00000391218 MYT1LQ9UL68 1186 aa3.32□□□□□ -1.88
RNU6-1250P-201ENST00000391218 BTBD11A6QL63 1104 aa3.31□□□□□ -1.88
RNU6-1250P-201ENST00000391218 TMEM121BQ9BXQ6 578 aaPredicted RBP3.3□□□□□ -1.88
RNU6-1250P-201ENST00000391218 ZNF775Q96BV0 537 aaPredicted RBP3.28□□□□□ -1.88
RNU6-1250P-201ENST00000391218 PLPPR3Q6T4P5 718 aa3.27□□□□□ -1.89
RNU6-1250P-201ENST00000391218 C7P10643 843 aa3.26□□□□□ -1.89
RNU6-1250P-201ENST00000391218 CHADLQ6NUI6 762 aa3.26□□□□□ -1.89
RNU6-1250P-201ENST00000391218 SLC39A7Q92504 469 aa3.26□□□□□ -1.89
RNU6-1250P-201ENST00000391218 KRTAP4-2Q9BYR5 136 aa3.26□□□□□ -1.89
RNU6-1250P-201ENST00000391218 POTEB3A0JP26 581 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms