Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC074051.2-201ENST00000565115 352 ntBASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC31.54■■■□□ 2.64
BIVM-ERCC5R4GMW8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 AL592071.1-201ENST00000611956 408 ntBASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 LINC00167-201ENST00000530583 1419 ntBASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC31.53■■■□□ 2.64
BIVM-ERCC5R4GMW8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC125437.2-201ENST00000625180 2167 ntBASIC31.52■■■□□ 2.64
BIVM-ERCC5R4GMW8 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
BIVM-ERCC5R4GMW8 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC31.51■■■□□ 2.64
BIVM-ERCC5R4GMW8 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
BIVM-ERCC5R4GMW8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
BIVM-ERCC5R4GMW8 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 AL671883.3-201ENST00000603274 991 ntBASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
BIVM-ERCC5R4GMW8 KRT8P32-201ENST00000512863 1461 ntBASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 KRT18P31-201ENST00000506277 1292 ntBASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 AP000867.3-201ENST00000524675 377 ntBASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 AC138894.3-201ENST00000603787 634 ntBASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 PWWP2AP1-201ENST00000429776 2273 ntBASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
BIVM-ERCC5R4GMW8 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 AP002469.2-201ENST00000531724 424 ntBASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 LINC01006-201ENST00000333319 2292 ntBASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 AC104819.1-201ENST00000504587 486 ntBASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
BIVM-ERCC5R4GMW8 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC31.48■■■□□ 2.63
BIVM-ERCC5R4GMW8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
BIVM-ERCC5R4GMW8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC31.48■■■□□ 2.63
BIVM-ERCC5R4GMW8 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BIVM-ERCC5R4GMW8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BIVM-ERCC5R4GMW8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC31.47■■■□□ 2.63
BIVM-ERCC5R4GMW8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BIVM-ERCC5R4GMW8 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
BIVM-ERCC5R4GMW8 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
BIVM-ERCC5R4GMW8 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms