Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLIC4Q9Y696 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 KSR1P1-201ENST00000446298 240 ntBASIC21.61■■□□□ 1.05
CLIC4Q9Y696 TSPY20P-201ENST00000450910 630 ntBASIC21.61■■□□□ 1.05
CLIC4Q9Y696 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 CR392000.1-201ENST00000624770 1228 ntBASIC21.61■■□□□ 1.05
CLIC4Q9Y696 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLIC4Q9Y696 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 AL359736.2-201ENST00000621992 437 ntBASIC21.6■■□□□ 1.05
CLIC4Q9Y696 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.6■■□□□ 1.05
CLIC4Q9Y696 HEIH-201ENST00000623091 1652 ntBASIC21.6■■□□□ 1.05
CLIC4Q9Y696 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 AF186192.3-201ENST00000583427 947 ntBASIC21.59■■□□□ 1.05
CLIC4Q9Y696 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.59■■□□□ 1.05
CLIC4Q9Y696 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 KRT16P1-201ENST00000399124 1418 ntBASIC21.58■■□□□ 1.05
CLIC4Q9Y696 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
CLIC4Q9Y696 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.58■■□□□ 1.04
CLIC4Q9Y696 AC126763.1-201ENST00000552015 2118 ntBASIC21.58■■□□□ 1.04
CLIC4Q9Y696 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms