Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.33■□□□□ 0.37
PCDHGB1Q9Y5G3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 AC126763.1-201ENST00000552015 2118 ntBASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PCDHGB1Q9Y5G3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 GPX1P1-201ENST00000388829 606 ntBASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 TSPY20P-201ENST00000450910 630 ntBASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 AC009053.2-201ENST00000563701 2365 ntBASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PCDHGB1Q9Y5G3 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 AC011767.1-201ENST00000617410 1153 ntBASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 AC083906.6-201ENST00000641366 219 ntBASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 GNAS-203ENST00000306120 1878 ntBASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PCDHGB1Q9Y5G3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PCDHGB1Q9Y5G3 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms