Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AC098818.2-201ENST00000564925 2320 ntBASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 C2orf69P3-201ENST00000565542 1120 ntBASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PCDHB1Q9Y5F3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 TSPY23P-201ENST00000440136 739 ntBASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 AC026271.3-201ENST00000571884 352 ntBASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHB1Q9Y5F3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 B3GAT3P1-201ENST00000471720 806 ntBASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHB1Q9Y5F3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 AC087289.5-201ENST00000586076 3175 ntBASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 TNXA-203ENST00000507684 2038 ntBASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHB1Q9Y5F3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms