Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSX2IPQ9Y2D8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 AL162377.1-201ENST00000618844 1793 ntBASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.33■□□□□ 0.84
SSX2IPQ9Y2D8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 PCDHAC2-203ENST00000615316 3011 ntBASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SSX2IPQ9Y2D8 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.31■□□□□ 0.84
SSX2IPQ9Y2D8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 STARP1-201ENST00000397973 869 ntBASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 BCL2-203ENST00000589955 5011 ntBASIC20.3■□□□□ 0.84
SSX2IPQ9Y2D8 AFG3L1P-217ENST00000557444 2447 ntBASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 TSPY21P-201ENST00000433481 731 ntBASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 KRT18P56-201ENST00000507275 550 ntBASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.29■□□□□ 0.84
SSX2IPQ9Y2D8 AL136038.3-201ENST00000561909 1096 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms