Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 KRT18P68-201ENST00000392293 1000 ntBASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 AC142381.2-201ENST00000566120 298 ntBASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.27■□□□□ 0.35
ERGIC3Q9Y282 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
ERGIC3Q9Y282 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
ERGIC3Q9Y282 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERGIC3Q9Y282 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
ERGIC3Q9Y282 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERGIC3Q9Y282 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
ERGIC3Q9Y282 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 AC010536.3-201ENST00000620306 533 ntBASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 AC046158.3-201ENST00000624947 2558 ntBASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ERGIC3Q9Y282 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 AC116351.2-201ENST00000606540 1585 ntBASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 AC005837.3-201ENST00000612163 286 ntBASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.25■□□□□ 0.35
ERGIC3Q9Y282 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
ERGIC3Q9Y282 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms