Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.28■□□□□ 0.68
CHMP2BQ9UQN3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 TSPY21P-201ENST00000433481 731 ntBASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 PRKY-204ENST00000533551 1019 ntBASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 AC104771.1-201ENST00000603335 964 ntBASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHMP2BQ9UQN3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2BQ9UQN3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2BQ9UQN3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2BQ9UQN3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2BQ9UQN3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.27■□□□□ 0.67
CHMP2BQ9UQN3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2BQ9UQN3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHMP2BQ9UQN3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 TSPY23P-201ENST00000440136 739 ntBASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 AL160286.2-201ENST00000567150 934 ntBASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 C1QL1P1-201ENST00000568105 661 ntBASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 AC142086.2-201ENST00000569753 217 ntBASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 NBPF21P-201ENST00000425093 1451 ntBASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHMP2BQ9UQN3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 LTB4R2-202ENST00000528054 3092 ntBASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 BICD1-207ENST00000551848 1962 ntBASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHMP2BQ9UQN3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CHMP2BQ9UQN3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms