Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 AC116562.4-201ENST00000641316 2276 ntBASIC20.01■□□□□ 0.79
CDH9Q9ULB4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDH9Q9ULB4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CDH9Q9ULB4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20■□□□□ 0.79
CDH9Q9ULB4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDH9Q9ULB4 ANKRD20A18P-201ENST00000359341 492 ntBASIC20■□□□□ 0.79
CDH9Q9ULB4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20■□□□□ 0.79
CDH9Q9ULB4 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20■□□□□ 0.79
CDH9Q9ULB4 MIR3180-5-201ENST00000583743 153 ntBASIC20■□□□□ 0.79
CDH9Q9ULB4 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDH9Q9ULB4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CDH9Q9ULB4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20■□□□□ 0.79
CDH9Q9ULB4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20■□□□□ 0.79
CDH9Q9ULB4 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDH9Q9ULB4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 RCC2P3-201ENST00000418112 1537 ntBASIC19.99■□□□□ 0.79
CDH9Q9ULB4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.99■□□□□ 0.79
CDH9Q9ULB4 RNF152P1-201ENST00000397754 604 ntBASIC19.99■□□□□ 0.79
CDH9Q9ULB4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 AC140113.3-201ENST00000605663 199 ntBASIC19.99■□□□□ 0.79
CDH9Q9ULB4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDH9Q9ULB4 KRT8P32-201ENST00000512863 1461 ntBASIC19.99■□□□□ 0.79
CDH9Q9ULB4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 AL109659.2-201ENST00000606809 1674 ntBASIC19.98■□□□□ 0.79
CDH9Q9ULB4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 AC011558.1-201ENST00000623459 338 ntBASIC19.98■□□□□ 0.79
CDH9Q9ULB4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDH9Q9ULB4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 AC036111.1-201ENST00000533973 1582 ntBASIC19.97■□□□□ 0.79
CDH9Q9ULB4 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 TSPY5P-201ENST00000426936 936 ntBASIC19.97■□□□□ 0.79
CDH9Q9ULB4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 AC063952.2-201ENST00000498792 1227 ntBASIC19.97■□□□□ 0.79
CDH9Q9ULB4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 AL023973.1-201ENST00000624619 620 ntBASIC19.97■□□□□ 0.79
CDH9Q9ULB4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDH9Q9ULB4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms