Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIX4Q9UIU6 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.24■□□□□ 0.83
SIX4Q9UIU6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 MCCD1P1-208ENST00000445732 328 ntBASIC20.23■□□□□ 0.83
SIX4Q9UIU6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 AC036111.1-201ENST00000533973 1582 ntBASIC20.23■□□□□ 0.83
SIX4Q9UIU6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 AC008556.1-201ENST00000610908 2040 ntBASIC20.23■□□□□ 0.83
SIX4Q9UIU6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SIX4Q9UIU6 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 AL109659.2-201ENST00000606809 1674 ntBASIC20.22■□□□□ 0.83
SIX4Q9UIU6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 AC006333.2-201ENST00000607957 2099 ntBASIC20.22■□□□□ 0.83
SIX4Q9UIU6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 WWOX-216ENST00000569818 525 ntBASIC20.22■□□□□ 0.83
SIX4Q9UIU6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 AC141257.4-201ENST00000634557 245 ntBASIC20.22■□□□□ 0.83
SIX4Q9UIU6 AC136944.6-201ENST00000634818 245 ntBASIC20.22■□□□□ 0.83
SIX4Q9UIU6 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIX4Q9UIU6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 TMPOP1-202ENST00000424642 1267 ntBASIC20.21■□□□□ 0.83
SIX4Q9UIU6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 LIN28AP1-201ENST00000429574 405 ntBASIC20.21■□□□□ 0.83
SIX4Q9UIU6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 AC006011.2-201ENST00000621313 1158 ntBASIC20.21■□□□□ 0.83
SIX4Q9UIU6 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIX4Q9UIU6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms