Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 AP005242.2-201ENST00000580065 1175 ntBASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PPARGC1AQ9UBK2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.74
PPARGC1AQ9UBK2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 TSPY15P-201ENST00000457163 923 ntBASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 AC097488.1-201ENST00000507834 756 ntBASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 CKBP1-201ENST00000565489 1086 ntBASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PPARGC1AQ9UBK2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 FITM1-202ENST00000559294 800 ntBASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PPARGC1AQ9UBK2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PPARGC1AQ9UBK2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms