Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREX1Q9NSU2 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TREX1Q9NSU2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.89■□□□□ 0.61
TREX1Q9NSU2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.89■□□□□ 0.61
TREX1Q9NSU2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 NEFHP1-201ENST00000412845 2629 ntBASIC18.88■□□□□ 0.61
TREX1Q9NSU2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 AC096733.2-201ENST00000609937 1394 ntBASIC18.88■□□□□ 0.61
TREX1Q9NSU2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 AC005082.1-201ENST00000413042 2259 ntBASIC18.88■□□□□ 0.61
TREX1Q9NSU2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TREX1Q9NSU2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 AL049637.2-201ENST00000641778 930 ntBASIC18.87■□□□□ 0.61
TREX1Q9NSU2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.87■□□□□ 0.61
TREX1Q9NSU2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 DGCR10-201ENST00000609839 495 ntBASIC18.86■□□□□ 0.61
TREX1Q9NSU2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 AC090164.3-201ENST00000610780 2143 ntBASIC18.86■□□□□ 0.61
TREX1Q9NSU2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.86■□□□□ 0.61
TREX1Q9NSU2 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TREX1Q9NSU2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms