Protein–RNA interactions for Protein: Q9NPA1

KCNMB3, Calcium-activated potassium channel subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMB3Q9NPA1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KCNMB3Q9NPA1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 TERF1P1-201ENST00000311003 1181 ntBASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.24■□□□□ 0.99
KCNMB3Q9NPA1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 BX323043.1-201ENST00000641006 1765 ntBASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 MCCD1P1-208ENST00000445732 328 ntBASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 AL138966.2-201ENST00000621997 464 ntBASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 CR769767.2-201ENST00000622735 460 ntBASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 AP000974.1-201ENST00000623909 2387 ntBASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.23■□□□□ 0.99
KCNMB3Q9NPA1 AC008556.1-201ENST00000610908 2040 ntBASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 WWOX-216ENST00000569818 525 ntBASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 MTMR9LP-203ENST00000426597 1545 ntBASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
KCNMB3Q9NPA1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 AC018445.3-201ENST00000624177 1945 ntBASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 AC005521.1-201ENST00000393351 872 ntBASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 RCN1P1-201ENST00000400413 996 ntBASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KCNMB3Q9NPA1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms