Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRTM1Q9HBL6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LRTM1Q9HBL6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
LRTM1Q9HBL6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.2■□□□□ 0.5
LRTM1Q9HBL6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 Z85996.1-201ENST00000494644 937 ntBASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRTM1Q9HBL6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 ESRRAP1-201ENST00000400596 1257 ntBASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 KRT18P6-201ENST00000555540 1265 ntBASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.18■□□□□ 0.5
LRTM1Q9HBL6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms