Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 AL049812.1-201ENST00000432563 2267 ntBASIC20.18■□□□□ 0.82
SYNCQ9H7C4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SYNCQ9H7C4 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 TSPY23P-201ENST00000440136 739 ntBASIC20.17■□□□□ 0.82
SYNCQ9H7C4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.17■□□□□ 0.82
SYNCQ9H7C4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.16■□□□□ 0.82
SYNCQ9H7C4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 Z99916.2-201ENST00000604037 246 ntBASIC20.16■□□□□ 0.82
SYNCQ9H7C4 MIR6786-201ENST00000616843 113 ntBASIC20.16■□□□□ 0.82
SYNCQ9H7C4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 AC098818.2-201ENST00000564925 2320 ntBASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.16■□□□□ 0.82
SYNCQ9H7C4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.16■□□□□ 0.82
SYNCQ9H7C4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 AC091390.4-202ENST00000476426 537 ntBASIC20.15■□□□□ 0.82
SYNCQ9H7C4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 AC113410.3-201ENST00000623366 203 ntBASIC20.15■□□□□ 0.82
SYNCQ9H7C4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.15■□□□□ 0.82
SYNCQ9H7C4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SYNCQ9H7C4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
SYNCQ9H7C4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
SYNCQ9H7C4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.14■□□□□ 0.82
SYNCQ9H7C4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms