Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 SLC25A1P2-201ENST00000430693 912 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 MFAP1P1-201ENST00000442257 1255 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 AC008040.2-201ENST00000461049 708 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 CA15P1-201ENST00000481698 905 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 PRSS44-201ENST00000515154 1146 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 KRT8P41-201ENST00000533985 1514 ntBASIC13.17□□□□□ -0.3
UPK3BQ9BT76 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UPK3BQ9BT76 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 CCR12P-201ENST00000446203 998 ntBASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AC005363.2-201ENST00000618631 242 ntBASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 ZNF815P-204ENST00000434898 1737 ntBASIC13.16□□□□□ -0.3
UPK3BQ9BT76 CYP2D8P-201ENST00000433633 1490 ntBASIC13.16□□□□□ -0.3
UPK3BQ9BT76 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 LBX2-AS1-202ENST00000603175 2083 ntBASIC13.16□□□□□ -0.3
UPK3BQ9BT76 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UPK3BQ9BT76 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UPK3BQ9BT76 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms