Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 SOX15-203ENST00000570788 1093 ntBASIC11.27□□□□□ -0.61
LIMD2Q9BT23 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AL121829.2-201ENST00000620908 328 ntBASIC11.27□□□□□ -0.61
LIMD2Q9BT23 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
LIMD2Q9BT23 AC116562.4-201ENST00000641316 2276 ntBASIC11.26□□□□□ -0.61
LIMD2Q9BT23 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AC007613.1-201ENST00000572811 2597 ntBASIC11.26□□□□□ -0.61
LIMD2Q9BT23 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 TREX2-204ENST00000370212 861 ntTSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AL355802.2-201ENST00000402069 882 ntBASIC11.26□□□□□ -0.61
LIMD2Q9BT23 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AC008687.6-201ENST00000596318 630 ntBASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AC104771.1-201ENST00000603335 964 ntBASIC11.26□□□□□ -0.61
LIMD2Q9BT23 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC11.26□□□□□ -0.61
LIMD2Q9BT23 TREX1-205ENST00000625293 1783 ntBASIC11.26□□□□□ -0.61
LIMD2Q9BT23 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
LIMD2Q9BT23 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms