Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS2Q99743 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS2Q99743 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS2Q99743 AC124016.1-201ENST00000609552 612 ntBASIC18.53■□□□□ 0.56
NPAS2Q99743 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.53■□□□□ 0.56
NPAS2Q99743 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
NPAS2Q99743 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.53■□□□□ 0.56
NPAS2Q99743 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
NPAS2Q99743 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.53■□□□□ 0.56
NPAS2Q99743 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
NPAS2Q99743 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
NPAS2Q99743 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.52■□□□□ 0.56
NPAS2Q99743 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS2Q99743 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 AL512353.2-201ENST00000448759 1962 ntBASIC18.52■□□□□ 0.56
NPAS2Q99743 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS2Q99743 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.52■□□□□ 0.56
NPAS2Q99743 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
NPAS2Q99743 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
NPAS2Q99743 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.52■□□□□ 0.56
NPAS2Q99743 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
NPAS2Q99743 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
NPAS2Q99743 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NPAS2Q99743 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS2Q99743 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS2Q99743 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS2Q99743 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS2Q99743 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.52■□□□□ 0.55
NPAS2Q99743 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
NPAS2Q99743 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
NPAS2Q99743 BICD1-207ENST00000551848 1962 ntBASIC18.51■□□□□ 0.55
NPAS2Q99743 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS2Q99743 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NPAS2Q99743 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
NPAS2Q99743 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.51■□□□□ 0.55
NPAS2Q99743 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
NPAS2Q99743 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.51■□□□□ 0.55
NPAS2Q99743 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.51■□□□□ 0.55
NPAS2Q99743 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.51■□□□□ 0.55
NPAS2Q99743 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.51■□□□□ 0.55
NPAS2Q99743 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.51■□□□□ 0.55
NPAS2Q99743 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
NPAS2Q99743 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
NPAS2Q99743 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.51■□□□□ 0.55
NPAS2Q99743 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
NPAS2Q99743 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NPAS2Q99743 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NPAS2Q99743 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.5■□□□□ 0.55
NPAS2Q99743 AL354751.1-201ENST00000412768 1863 ntBASIC18.5■□□□□ 0.55
NPAS2Q99743 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
NPAS2Q99743 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.5■□□□□ 0.55
NPAS2Q99743 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
NPAS2Q99743 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
NPAS2Q99743 AC133681.1-201ENST00000465482 601 ntBASIC18.5■□□□□ 0.55
NPAS2Q99743 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.5■□□□□ 0.55
NPAS2Q99743 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
NPAS2Q99743 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.5■□□□□ 0.55
NPAS2Q99743 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.5■□□□□ 0.55
NPAS2Q99743 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.5■□□□□ 0.55
NPAS2Q99743 Z99916.2-201ENST00000604037 246 ntBASIC18.5■□□□□ 0.55
NPAS2Q99743 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.5■□□□□ 0.55
NPAS2Q99743 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NPAS2Q99743 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 LTB4R2-202ENST00000528054 3092 ntBASIC18.5■□□□□ 0.55
NPAS2Q99743 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.5■□□□□ 0.55
NPAS2Q99743 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NPAS2Q99743 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.5■□□□□ 0.55
NPAS2Q99743 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.5■□□□□ 0.55
NPAS2Q99743 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
NPAS2Q99743 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms