Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 AC008622.2-201ENST00000617006 1229 ntBASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.54■□□□□ 0.72
PRICKLE1Q96MT3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 IRX1P1-201ENST00000438849 1838 ntBASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 AL138966.2-201ENST00000621997 464 ntBASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PRICKLE1Q96MT3 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 AC006011.2-201ENST00000621313 1158 ntBASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
PRICKLE1Q96MT3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE1Q96MT3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE1Q96MT3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE1Q96MT3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PRICKLE1Q96MT3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.52■□□□□ 0.71
PRICKLE1Q96MT3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
PRICKLE1Q96MT3 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 KRT8P45-201ENST00000414328 1447 ntBASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PRICKLE1Q96MT3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms