Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC39Q96DD0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRC39Q96DD0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRC39Q96DD0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.13■□□□□ 0.65
LRRC39Q96DD0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRC39Q96DD0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
LRRC39Q96DD0 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.12■□□□□ 0.65
LRRC39Q96DD0 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRC39Q96DD0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 AL162741.1-201ENST00000565563 1558 ntBASIC19.11■□□□□ 0.65
LRRC39Q96DD0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 AC026366.1-201ENST00000488803 879 ntBASIC19.11■□□□□ 0.65
LRRC39Q96DD0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 AC007613.1-201ENST00000572811 2597 ntBASIC19.11■□□□□ 0.65
LRRC39Q96DD0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRC39Q96DD0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 AL445675.2-201ENST00000620291 557 ntBASIC19.1■□□□□ 0.65
LRRC39Q96DD0 AC068587.9-201ENST00000641814 219 ntBASIC19.1■□□□□ 0.65
LRRC39Q96DD0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRC39Q96DD0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRC39Q96DD0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms