Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
VPS33AQ96AX1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 HLA-B-256ENST00000639848 1089 ntBASIC18.19■□□□□ 0.5
VPS33AQ96AX1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS33AQ96AX1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.18■□□□□ 0.5
VPS33AQ96AX1 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 AC006970.2-201ENST00000450065 779 ntBASIC18.18■□□□□ 0.5
VPS33AQ96AX1 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.18■□□□□ 0.5
VPS33AQ96AX1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 PNMA6B-201ENST00000538162 1200 ntBASIC18.18■□□□□ 0.5
VPS33AQ96AX1 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 AC120498.8-201ENST00000614275 531 ntBASIC18.18■□□□□ 0.5
VPS33AQ96AX1 AC083906.6-201ENST00000641366 219 ntBASIC18.18■□□□□ 0.5
VPS33AQ96AX1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS33AQ96AX1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.17■□□□□ 0.5
VPS33AQ96AX1 MYC-209ENST00000641252 345 ntBASIC18.17■□□□□ 0.5
VPS33AQ96AX1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VPS33AQ96AX1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS33AQ96AX1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.16■□□□□ 0.5
VPS33AQ96AX1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS33AQ96AX1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VPS33AQ96AX1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VPS33AQ96AX1 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms