Protein–RNA interactions for Protein: Q96A83

COL26A1, Collagen alpha-1(XXVI) chain, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL26A1Q96A83 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.28■□□□□ 0.52
COL26A1Q96A83 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 AC130371.2-201ENST00000619443 611 ntBASIC18.28■□□□□ 0.52
COL26A1Q96A83 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
COL26A1Q96A83 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
COL26A1Q96A83 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 AC073508.3-201ENST00000619697 1419 ntBASIC18.27■□□□□ 0.52
COL26A1Q96A83 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.27■□□□□ 0.52
COL26A1Q96A83 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
COL26A1Q96A83 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 AC097488.1-201ENST00000507834 756 ntBASIC18.27■□□□□ 0.52
COL26A1Q96A83 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 SLC25A1P4-201ENST00000567977 778 ntBASIC18.27■□□□□ 0.52
COL26A1Q96A83 DGCR10-201ENST00000609839 495 ntBASIC18.27■□□□□ 0.52
COL26A1Q96A83 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.27■□□□□ 0.52
COL26A1Q96A83 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.27■□□□□ 0.52
COL26A1Q96A83 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.27■□□□□ 0.51
COL26A1Q96A83 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL26A1Q96A83 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
COL26A1Q96A83 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL26A1Q96A83 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
COL26A1Q96A83 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 AL022342.1-201ENST00000400363 863 ntBASIC18.26■□□□□ 0.51
COL26A1Q96A83 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 FAM207BP-201ENST00000447172 505 ntBASIC18.26■□□□□ 0.51
COL26A1Q96A83 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 FITM1-202ENST00000559294 800 ntBASIC18.26■□□□□ 0.51
COL26A1Q96A83 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.26■□□□□ 0.51
COL26A1Q96A83 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COL26A1Q96A83 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL26A1Q96A83 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL26A1Q96A83 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.25■□□□□ 0.51
COL26A1Q96A83 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.25■□□□□ 0.51
COL26A1Q96A83 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL26A1Q96A83 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL26A1Q96A83 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.25■□□□□ 0.51
COL26A1Q96A83 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL26A1Q96A83 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms