Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.37■■□□□ 1.33
SSH3Q8TE77 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC23.37■■□□□ 1.33
SSH3Q8TE77 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
SSH3Q8TE77 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
SSH3Q8TE77 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 AC093525.10-201ENST00000625130 1569 ntBASIC23.36■■□□□ 1.33
SSH3Q8TE77 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 HMGA1P5-201ENST00000412453 271 ntBASIC23.36■■□□□ 1.33
SSH3Q8TE77 ECEL1P3-201ENST00000427961 737 ntBASIC23.36■■□□□ 1.33
SSH3Q8TE77 SLC25A3P1-201ENST00000443844 931 ntBASIC23.36■■□□□ 1.33
SSH3Q8TE77 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 LINC01023-201ENST00000606054 436 ntBASIC23.36■■□□□ 1.33
SSH3Q8TE77 AC008556.1-201ENST00000610908 2040 ntBASIC23.36■■□□□ 1.33
SSH3Q8TE77 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.36■■□□□ 1.33
SSH3Q8TE77 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
SSH3Q8TE77 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 TNXA-203ENST00000507684 2038 ntBASIC23.35■■□□□ 1.33
SSH3Q8TE77 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
SSH3Q8TE77 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SSH3Q8TE77 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 KRT8P45-201ENST00000414328 1447 ntBASIC23.34■■□□□ 1.33
SSH3Q8TE77 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 MCCD1P1-208ENST00000445732 328 ntBASIC23.34■■□□□ 1.33
SSH3Q8TE77 WWOX-216ENST00000569818 525 ntBASIC23.34■■□□□ 1.33
SSH3Q8TE77 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 CR769767.2-201ENST00000622735 460 ntBASIC23.34■■□□□ 1.33
SSH3Q8TE77 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SSH3Q8TE77 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
SSH3Q8TE77 AC073508.3-201ENST00000619697 1419 ntBASIC23.33■■□□□ 1.33
SSH3Q8TE77 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSH3Q8TE77 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
SSH3Q8TE77 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC23.33■■□□□ 1.33
SSH3Q8TE77 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
SSH3Q8TE77 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SSH3Q8TE77 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSH3Q8TE77 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSH3Q8TE77 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.33■■□□□ 1.33
SSH3Q8TE77 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SSH3Q8TE77 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSH3Q8TE77 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.33
SSH3Q8TE77 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SSH3Q8TE77 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
SSH3Q8TE77 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
SSH3Q8TE77 AL031598.1-201ENST00000561511 1773 ntBASIC23.32■■□□□ 1.32
SSH3Q8TE77 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
SSH3Q8TE77 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SSH3Q8TE77 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SSH3Q8TE77 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC23.32■■□□□ 1.32
SSH3Q8TE77 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 AC010203.1-204ENST00000548782 407 ntBASIC23.32■■□□□ 1.32
SSH3Q8TE77 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 P4HB-223ENST00000576390 439 ntTSL 4 BASIC23.32■■□□□ 1.32
SSH3Q8TE77 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC23.32■■□□□ 1.32
SSH3Q8TE77 AC087289.5-201ENST00000586076 3175 ntBASIC23.32■■□□□ 1.32
SSH3Q8TE77 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SSH3Q8TE77 SNAI3-AS1-205ENST00000568633 2096 ntBASIC23.32■■□□□ 1.32
SSH3Q8TE77 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
SSH3Q8TE77 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms