Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 WDR6-223ENST00000627177 207 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 AC093525.10-201ENST00000625130 1569 ntBASIC14.72□□□□□ -0.05
LINC01006Q8NI28 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.72□□□□□ -0.05
LINC01006Q8NI28 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 MIR662-201ENST00000384847 95 ntBASIC14.71□□□□□ -0.05
LINC01006Q8NI28 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 AC111152.3-201ENST00000569699 673 ntBASIC14.71□□□□□ -0.05
LINC01006Q8NI28 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
LINC01006Q8NI28 AL157384.1-201ENST00000445995 2473 ntBASIC14.71□□□□□ -0.05
LINC01006Q8NI28 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01006Q8NI28 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01006Q8NI28 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01006Q8NI28 AL109659.2-201ENST00000606809 1674 ntBASIC14.71□□□□□ -0.06
LINC01006Q8NI28 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.71□□□□□ -0.06
LINC01006Q8NI28 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
LINC01006Q8NI28 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 TSPY22P-201ENST00000427496 604 ntBASIC14.7□□□□□ -0.06
LINC01006Q8NI28 CHCHD2P8-201ENST00000429873 447 ntBASIC14.7□□□□□ -0.06
LINC01006Q8NI28 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
LINC01006Q8NI28 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 KRT8P7-201ENST00000533003 1432 ntBASIC14.69□□□□□ -0.06
LINC01006Q8NI28 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC01006Q8NI28 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms