Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 UNC93B2-201ENST00000285383 730 ntBASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.07■□□□□ 0.48
SRFBP1Q8NEF9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 AC097488.1-201ENST00000507834 756 ntBASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 SLC25A1P4-201ENST00000567977 778 ntBASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 MIR4497-201ENST00000583208 89 ntBASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SRFBP1Q8NEF9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 TSPY7P-201ENST00000431358 1114 ntBASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 SNORA78-201ENST00000459373 127 ntBASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 KRT8P3-201ENST00000519669 1449 ntBASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
SRFBP1Q8NEF9 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 AP000974.1-201ENST00000623909 2387 ntBASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRFBP1Q8NEF9 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms