Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.7■□□□□ 0.1
ZNF439Q8NDP4 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ZNF439Q8NDP4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 TSPY21P-201ENST00000433481 731 ntBASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 C1QBPP2-201ENST00000528754 825 ntBASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ZNF439Q8NDP4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 Z85996.1-201ENST00000494644 937 ntBASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 RPPH1-201ENST00000516869 333 ntBASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 AL445675.2-201ENST00000620291 557 ntBASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 FEM1AP3-201ENST00000403722 1741 ntBASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZNF439Q8NDP4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms