Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC139530.3-201ENST00000620344 690 ntBASIC29.63■■■□□ 2.33
CFAP43Q8NDM7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
CFAP43Q8NDM7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC29.63■■■□□ 2.33
CFAP43Q8NDM7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
CFAP43Q8NDM7 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 AL162741.1-201ENST00000565563 1558 ntBASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
CFAP43Q8NDM7 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC29.6■■■□□ 2.33
CFAP43Q8NDM7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
CFAP43Q8NDM7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 HLA-A-201ENST00000376802 1334 ntBASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC29.58■■■□□ 2.33
CFAP43Q8NDM7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 PMS2P1-201ENST00000431037 1228 ntBASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 HLA-F-220ENST00000434407 884 ntBASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
CFAP43Q8NDM7 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
CFAP43Q8NDM7 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms