Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.43■■□□□ 1.02
RETREG2Q8NC44 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 AC092338.2-201ENST00000568827 1415 ntBASIC21.42■■□□□ 1.02
RETREG2Q8NC44 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
RETREG2Q8NC44 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 KRT18P56-201ENST00000507275 550 ntBASIC21.41■■□□□ 1.02
RETREG2Q8NC44 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 AC140113.3-201ENST00000605663 199 ntBASIC21.41■■□□□ 1.02
RETREG2Q8NC44 AC011558.1-201ENST00000623459 338 ntBASIC21.41■■□□□ 1.02
RETREG2Q8NC44 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RETREG2Q8NC44 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.41■■□□□ 1.02
RETREG2Q8NC44 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 LINC01465-201ENST00000408887 1940 ntBASIC21.4■■□□□ 1.02
RETREG2Q8NC44 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.4■■□□□ 1.02
RETREG2Q8NC44 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.4■■□□□ 1.02
RETREG2Q8NC44 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RETREG2Q8NC44 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RETREG2Q8NC44 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 AL353719.1-201ENST00000566847 864 ntBASIC21.39■■□□□ 1.01
RETREG2Q8NC44 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 AL023803.3-201ENST00000615559 522 ntBASIC21.39■■□□□ 1.01
RETREG2Q8NC44 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
RETREG2Q8NC44 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms