Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 AL353719.1-201ENST00000566847 864 ntBASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PCDH20Q8N6Y1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 INGX-201ENST00000359239 846 ntBASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 AC007663.1-201ENST00000438948 1240 ntBASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 FAM87A-204ENST00000613235 858 ntBASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PCDH20Q8N6Y1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 AC120498.9-201ENST00000339021 3867 ntBASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 RCN1P1-201ENST00000400413 996 ntBASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 HMGA1P5-201ENST00000412453 271 ntBASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 AC093484.2-201ENST00000580996 2166 ntBASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
PCDH20Q8N6Y1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 AL137013.1-201ENST00000432946 1228 ntBASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDH20Q8N6Y1 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms