Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCDC33Q8N5R6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 TSPY14P-201ENST00000303979 915 ntBASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 WWOX-216ENST00000569818 525 ntBASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 AC011298.2-201ENST00000617989 482 ntBASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 AC130371.2-201ENST00000619443 611 ntBASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCDC33Q8N5R6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 RCC2P6-201ENST00000526625 1557 ntBASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 AC008040.2-201ENST00000461049 708 ntBASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 AC087388.1-201ENST00000571370 1112 ntBASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 AC006011.2-201ENST00000621313 1158 ntBASIC19.83■□□□□ 0.77
CCDC33Q8N5R6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 AL161938.1-201ENST00000569833 2180 ntBASIC19.83■□□□□ 0.76
CCDC33Q8N5R6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 AC128688.1-201ENST00000487626 519 ntBASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CCDC33Q8N5R6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms