Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LINC00528Q8N1L1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 ARMC10P1-201ENST00000313754 855 ntBASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SEPHS1P7-201ENST00000452995 1177 ntBASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 MTND2P39-201ENST00000457230 764 ntBASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 AC083964.1-201ENST00000607549 630 ntBASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
LINC00528Q8N1L1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 UNC93B2-201ENST00000285383 730 ntBASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AC115102.1-201ENST00000558044 487 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AL049597.2-201ENST00000565575 961 ntBASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 AC005363.2-201ENST00000618631 242 ntBASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 FCAR-203ENST00000355524 1483 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
LINC00528Q8N1L1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms