RNA–Protein interactions for RNA: ENST00000295896.12

C3orf49-201, Transcript of chromosome 3 open reading frame 49, humanhuman

APPRIS P5 TSL 2 BASIC

Gene C3orf49, Length 1,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-201ENST00000295896 CHIC1Q5VXU3 224 aa31.73■■■□□ 2.67
C3orf49-201ENST00000295896 AEBP2Q6ZN18 517 aaPredicted RBP31.61■■■□□ 2.65
C3orf49-201ENST00000295896 PHF23Q9BUL5 403 aaPredicted RBP27.92■■■□□ 2.06
C3orf49-201ENST00000295896 SENP3Q9H4L4 574 aaPredicted RBP26.82■■□□□ 1.88
C3orf49-201ENST00000295896 PLPPR3Q6T4P5 718 aa26.16■■□□□ 1.78
C3orf49-201ENST00000295896 FOXD1Q16676 465 aa24.71■■□□□ 1.55
C3orf49-201ENST00000295896 ADRA2BP18089 450 aa24.39■■□□□ 1.49
C3orf49-201ENST00000295896 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
C3orf49-201ENST00000295896 PIAS4Q8N2W9 510 aaPredicted RBP23.53■■□□□ 1.36
C3orf49-201ENST00000295896 KCNA4P22459 653 aa23.43■■□□□ 1.34
C3orf49-201ENST00000295896 PPP4R3CPQ6ZMV5 832 aa23.1■■□□□ 1.29
C3orf49-201ENST00000295896 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
C3orf49-201ENST00000295896 EHMT2Q96KQ7 1210 aa22.72■■□□□ 1.23
C3orf49-201ENST00000295896 MSH5O43196 834 aa22.57■■□□□ 1.2
C3orf49-201ENST00000295896 SLC4A1APQ9BWU0 796 aaKnown RBP22.51■■□□□ 1.19
C3orf49-201ENST00000295896 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
C3orf49-201ENST00000295896 NPM3O75607 178 aaKnown RBP22.39■■□□□ 1.17
C3orf49-201ENST00000295896 CNKSR2Q8WXI2 1034 aa22.32■■□□□ 1.16
C3orf49-201ENST00000295896 CSRNP3Q8WYN3 585 aa22.1■■□□□ 1.13
C3orf49-201ENST00000295896 MAPK8IP2Q13387 824 aaPredicted RBP21.86■■□□□ 1.09
C3orf49-201ENST00000295896 DNAJC5BQ9UF47 199 aa21.73■■□□□ 1.07
C3orf49-201ENST00000295896 RNF216Q9NWF9 866 aaPredicted RBP21.69■■□□□ 1.06
C3orf49-201ENST00000295896 ZBTB22O15209 634 aa21.55■■□□□ 1.04
C3orf49-201ENST00000295896 DMRT2Q9Y5R5 561 aa21.51■■□□□ 1.03
C3orf49-201ENST00000295896 FOXD4L1Q9NU39 408 aa21.41■■□□□ 1.02
C3orf49-201ENST00000295896 HOXD11P31277 338 aaPredicted RBP21.38■■□□□ 1.01
C3orf49-201ENST00000295896 SLC4A2P04920 1241 aa20.92■□□□□ 0.94
C3orf49-201ENST00000295896 MYCNP04198 464 aaPredicted RBP20.74■□□□□ 0.91
C3orf49-201ENST00000295896 ATXN8OSP0DMR3 200 aa20.64■□□□□ 0.89
C3orf49-201ENST00000295896 DCAF8L1A6NGE4 600 aa20.49■□□□□ 0.87
C3orf49-201ENST00000295896 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.37■□□□□ 0.85
C3orf49-201ENST00000295896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.23■□□□□ 0.83
C3orf49-201ENST00000295896 HNRNPUL2Q1KMD3 747 aaKnown RBP20.23■□□□□ 0.83
C3orf49-201ENST00000295896 SAMD1Q6SPF0 538 aaPredicted RBP20.17■□□□□ 0.82
C3orf49-201ENST00000295896 U3KPZ7 1027 aaPredicted RBP20.1■□□□□ 0.81
C3orf49-201ENST00000295896 ATF5Q9Y2D1 282 aaPredicted RBP19.99■□□□□ 0.79
C3orf49-201ENST00000295896 FKBP8Q14318 412 aa19.95■□□□□ 0.78
C3orf49-201ENST00000295896 APLP2Q06481 763 aa19.87■□□□□ 0.77
C3orf49-201ENST00000295896 ZNF219Q9P2Y4 722 aaPredicted RBP19.67■□□□□ 0.74
C3orf49-201ENST00000295896 AMER1Q5JTC6 1135 aaPredicted RBP19.66■□□□□ 0.74
C3orf49-201ENST00000295896 RTN4Q9NQC3 1192 aaKnown RBP19.52■□□□□ 0.72
C3orf49-201ENST00000295896 RNF39Q9H2S5 420 aa19.37■□□□□ 0.69
C3orf49-201ENST00000295896 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
C3orf49-201ENST00000295896 SPINK5Q9NQ38 1064 aaPredicted RBP19.27■□□□□ 0.68
C3orf49-201ENST00000295896 FBLN2P98095 1184 aa19.24■□□□□ 0.67
C3orf49-201ENST00000295896 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
C3orf49-201ENST00000295896 SPDYE4A6NLX3 237 aa19.2■□□□□ 0.66
C3orf49-201ENST00000295896 CAPN15O75808 1086 aa19.2■□□□□ 0.66
C3orf49-201ENST00000295896 MKRN4PQ13434 485 aaPredicted RBP19.2■□□□□ 0.66
C3orf49-201ENST00000295896 POLA2Q14181 598 aa19.15■□□□□ 0.66
C3orf49-201ENST00000295896 FBXO3Q9UK99 471 aa19.12■□□□□ 0.65
C3orf49-201ENST00000295896 POTEDQ86YR6 584 aa19.07■□□□□ 0.64
C3orf49-201ENST00000295896 ZBTB12Q9Y330 459 aaPredicted RBP19.03■□□□□ 0.64
C3orf49-201ENST00000295896 PROM2Q8N271 834 aa19.02■□□□□ 0.64
C3orf49-201ENST00000295896 SLC24A1O60721 1099 aa19■□□□□ 0.63
C3orf49-201ENST00000295896 ABCB7O75027 752 aa18.87■□□□□ 0.61
C3orf49-201ENST00000295896 VASPP50552 380 aaPredicted RBP18.78■□□□□ 0.6
C3orf49-201ENST00000295896 DSG3P32926 999 aa18.69■□□□□ 0.58
C3orf49-201ENST00000295896 IFNLR1Q8IU57 520 aaPredicted RBP18.54■□□□□ 0.56
C3orf49-201ENST00000295896 SPDYE2BA6NHP3 402 aa18.53■□□□□ 0.56
C3orf49-201ENST00000295896 SPDYE6P0CI01 402 aa18.53■□□□□ 0.56
C3orf49-201ENST00000295896 SPDYE2Q495Y8 402 aa18.53■□□□□ 0.56
C3orf49-201ENST00000295896 ZNF692Q9BU19 519 aaPredicted RBP18.53■□□□□ 0.56
C3orf49-201ENST00000295896 OSCARQ8IYS5 282 aa18.48■□□□□ 0.55
C3orf49-201ENST00000295896 SSUH2Q9Y2M2 353 aa18.45■□□□□ 0.54
C3orf49-201ENST00000295896 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
C3orf49-201ENST00000295896 PABPN1Q86U42 306 aaKnown RBP eCLIP18.3■□□□□ 0.52
C3orf49-201ENST00000295896 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
C3orf49-201ENST00000295896 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
C3orf49-201ENST00000295896 SPOCK2Q92563 424 aa18.24■□□□□ 0.51
C3orf49-201ENST00000295896 PKD2Q13563 968 aa18.22■□□□□ 0.51
C3orf49-201ENST00000295896 PLCD3Q8N3E9 789 aa18.2■□□□□ 0.5
C3orf49-201ENST00000295896 DCAF8L2P0C7V8 631 aa18.16■□□□□ 0.5
C3orf49-201ENST00000295896 MIER1Q8N108 512 aa18.11■□□□□ 0.49
C3orf49-201ENST00000295896 PLCB2Q00722 1185 aa18.1■□□□□ 0.49
C3orf49-201ENST00000295896 PLEKHG5O94827 1062 aa18.06■□□□□ 0.48
C3orf49-201ENST00000295896 ZBTB47Q9UFB7 747 aaPredicted RBP18.03■□□□□ 0.48
C3orf49-201ENST00000295896 ECM2O94769 699 aaPredicted RBP18.01■□□□□ 0.47
C3orf49-201ENST00000295896 RBM42Q9BTD8 480 aaKnown RBP17.88■□□□□ 0.45
C3orf49-201ENST00000295896 HAP1P54257 671 aaPredicted RBP17.82■□□□□ 0.44
C3orf49-201ENST00000295896 AKT1S1Q96B36 256 aa17.8■□□□□ 0.44
C3orf49-201ENST00000295896 SPDYE1Q8NFV5 336 aaPredicted RBP17.79■□□□□ 0.44
C3orf49-201ENST00000295896 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
C3orf49-201ENST00000295896 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.79■□□□□ 0.44
C3orf49-201ENST00000295896 CIZ1Q9ULV3 898 aaPredicted RBP17.79■□□□□ 0.44
C3orf49-201ENST00000295896 TRIM41Q8WV44 630 aa17.77■□□□□ 0.44
C3orf49-201ENST00000295896 RGL2O15211 777 aa17.76■□□□□ 0.43
C3orf49-201ENST00000295896 NPM1P06748 294 aaKnown RBP eCLIP17.67■□□□□ 0.42
C3orf49-201ENST00000295896 GSE1Q14687 1217 aa17.65■□□□□ 0.42
C3orf49-201ENST00000295896 VSIG10Q8N0Z9 540 aa17.62■□□□□ 0.41
C3orf49-201ENST00000295896 CLEC11AQ9Y240 323 aa17.6■□□□□ 0.41
C3orf49-201ENST00000295896 PRR29P0C7W0 189 aa17.59■□□□□ 0.41
C3orf49-201ENST00000295896 PAXIP1Q6ZW49 1069 aaPredicted RBP17.58■□□□□ 0.4
C3orf49-201ENST00000295896 NUBP1P53384 320 aa17.57■□□□□ 0.4
C3orf49-201ENST00000295896 REM2Q8IYK8 340 aaPredicted RBP17.57■□□□□ 0.4
C3orf49-201ENST00000295896 CHGAP10645 457 aaKnown RBP17.53■□□□□ 0.4
C3orf49-201ENST00000295896 CFAP44Q96MT7 982 aa17.53■□□□□ 0.4
C3orf49-201ENST00000295896 CREBZFQ9NS37 354 aa17.52■□□□□ 0.4
C3orf49-201ENST00000295896 SPRYD3Q8NCJ5 442 aa17.5■□□□□ 0.39
C3orf49-201ENST00000295896 DCAF8Q5TAQ9 597 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms