Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHPFQ8IZ52 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHPFQ8IZ52 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.67
CHPFQ8IZ52 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 RNF165-205ENST00000588679 2904 ntBASIC19.26■□□□□ 0.67
CHPFQ8IZ52 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHPFQ8IZ52 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 AC112907.2-201ENST00000448639 330 ntBASIC19.25■□□□□ 0.67
CHPFQ8IZ52 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 CR769767.2-201ENST00000622735 460 ntBASIC19.25■□□□□ 0.67
CHPFQ8IZ52 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CHPFQ8IZ52 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 VENTXP5-201ENST00000523979 775 ntBASIC19.24■□□□□ 0.67
CHPFQ8IZ52 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 AC093458.2-201ENST00000623150 629 ntBASIC19.24■□□□□ 0.67
CHPFQ8IZ52 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 AC005332.1-201ENST00000577698 1310 ntBASIC19.24■□□□□ 0.67
CHPFQ8IZ52 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.24■□□□□ 0.67
CHPFQ8IZ52 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 STARP1-201ENST00000397973 869 ntBASIC19.23■□□□□ 0.67
CHPFQ8IZ52 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CHPFQ8IZ52 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CHPFQ8IZ52 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms