Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
C9orf40Q8IXQ3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 RCN1P1-201ENST00000400413 996 ntBASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 RCC2P3-201ENST00000418112 1537 ntBASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 KRT8P45-201ENST00000414328 1447 ntBASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
C9orf40Q8IXQ3 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
C9orf40Q8IXQ3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.46■□□□□ 0.38
C9orf40Q8IXQ3 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
C9orf40Q8IXQ3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
C9orf40Q8IXQ3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 KRT8P32-201ENST00000512863 1461 ntBASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 AL137013.1-201ENST00000432946 1228 ntBASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 AC073508.3-201ENST00000619697 1419 ntBASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.45■□□□□ 0.38
C9orf40Q8IXQ3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 KRT18P57-201ENST00000443599 1254 ntBASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 MCCD1P1-208ENST00000445732 328 ntBASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.44■□□□□ 0.38
C9orf40Q8IXQ3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.43■□□□□ 0.38
C9orf40Q8IXQ3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms